hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj22320/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0771  ( 1105 res)   mfj22320

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SH3      Src homology 3 domains                          76.6    3.1e-18   1
ANK      ankyrin repeats                                 70.6      2e-16   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/2     935   964 ..     1    30 []    38.8  7.1e-07
ANK        2/2     968   997 ..     1    30 []    32.0  8.2e-05
SH3        1/1    1037  1095 ..     1    58 []    76.6  3.1e-18

Alignments of top-scoring domains:
ANK: domain 1 of 2, from 935 to 964: score 38.8, E = 7.1e-07
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G TpLH A++ g++++vk+Lld g+++na   
   mKIAA0771   935    EGITPLHNAVCAGHHHIVKFLLDFGVNVNA    964  

ANK: domain 2 of 2, from 968 to 997: score 32.0, E = 8.2e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+TpLH+Aa+ ++++++k L+++ga i a   
   mKIAA0771   968    DGWTPLHCAASCNSVHLCKQLVESGAAIFA    997  

SH3: domain 1 of 1, from 1037 to 1095: score 76.6, E = 3.1e-18
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks...ddgWweGelnrtG
                      ++v Al+Dyeaqn+dELsF++GD it+l++ ++++ +Ww+++l+   
   mKIAA0771  1037    GTVYALWDYEAQNSDELSFHEGDAITILRRKdenETEWWWARLG--D 1081 

                   keGlfPsnYVeeie<-*
                   +eG++P+n + +++   
   mKIAA0771  1082 REGYVPKNLLGLYP    1095 

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