hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg14508/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0767  ( 568 res)   mbg14508

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
GRAM     GRAM domain                                     20.8      0.012   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
GRAM       1/1     466   513 ..     1    82 []    20.8    0.012

Alignments of top-scoring domains:
GRAM: domain 1 of 1, from 466 to 513: score 20.8, E = 0.012
                   *->ekfrkiFkeilppeEkLiadckaeVysCplqrpfskipvqGrlYltn
                      ++f++iF+  l ++E+ +a+                           
   mKIAA0767   466    GNFHEIFN--LTENERPLAS--------------------------- 483  

                   nrlcFrSdklgdltkegvyklviPladiervekes<-*
                    +lcF S+k+g++++    + vi+l di++++k++   
   mKIAA0767   484 -YLCFESSKSGSSKR----NKVIKLMDITDIQKYK    513  

//