hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp04234/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0763  ( 530 res)   mbp04234

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Sec7     Sec7 domain                                    332.2    3.5e-95   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Sec7       1/1      88   279 ..     1   226 []   332.2  3.5e-95

Alignments of top-scoring domains:
Sec7: domain 1 of 1, from 88 to 279: score 332.2, E = 3.5e-95
                   *->sknrkkllsegikkfnqkPkkGiqfLqekgflakevDdspqevAkfl
                      ++ rk+++ +g ++fn+kP+kGiq+L+e+gf++    d+p  vA+fl
   mKIAA0763    88    DVIRKRHYRIGLNLFNKKPEKGIQYLIERGFVP----DTPVGVAHFL 130  

                   ydseSadadeseteglnkkaiGdyLgeshdefnrlvLhafvdlfdFsgkd
                              +++gl++++iG++Lg+++++fnr+vL++ vd++dFs+++
   mKIAA0763   131 L----------QRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAME 170  

                   ldeALRefLesfrLPGEaQkIDRlleaFserYcecNpgvfskagkslski
                   ldeALR+f  ++r++GEaQk++Rl+eaFs+rYc cNpgv ++++      
   mKIAA0763   171 LDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCVCNPGVVRQFR------ 214  

                   qqllnaDaaYvLaYSlIMLNTDLHnpnvkkskakdiLvKMtkedFikNlr
                       n+D++++La+++I+LNTD+++pnvk ++      KM++edF+kNlr
   mKIAA0763   215 ----NPDTIFILAFAIILLNTDMYSPNVKPER------KMKLEDFVKNLR 254  

                   ginkeiddgedlprefLeelYdsIknnei<-*
                   g++    dged+pre L ++Y++I+++e+   
   mKIAA0763   255 GVD----DGEDIPRETLIGIYERIRKREL    279  

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