hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpg/mpg01166/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0751  ( 1297 res)   mpg01166

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       C2 domain                                      190.0    3.8e-53   2
PDZ      PDZ domain (Also known as DHR or GLGF)          21.6      0.011   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PDZ        1/1     358   443 ..     1    82 []    21.6    0.011
C2         1/2     512   603 ..     1    88 []   106.6  4.8e-28
C2         2/2    1158  1245 ..     1    88 []    83.4  4.7e-21

Alignments of top-scoring domains:
PDZ: domain 1 of 1, from 358 to 443: score 21.6, E = 0.011
                   *->evtlekevkrgglGfsikggsdk.....givvsevlpGsgaAeagGr
                      + +++++ ++  lG++++gg+  ++++  +++++v +G + A+  G 
   mKIAA0751   358    DGSVPRD-SGAMLGLKVVGGKMTesgrlCAFITKVKKG-SLADTVGH 402  

                   LkeGDqIlsvNGqdvenlsheravlalkgsgg.sevtLtil<-*
                   L++GD +l+ NG+ + + + e++  ++ +s+ + +v L++    
   mKIAA0751   403 LRPGDEVLEWNGRLLQGATFEEVYNIILESKPePQVELVVS    443  

C2: domain 1 of 2, from 512 to 603: score 106.6, E = 4.8e-28
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkd.qkkkTkvikkt
                      L Vt++ Ak+Lp +   ++  +PYVk+++++d++d++k++Tk++kkt
   mKIAA0751   512    LIVTILGAKDLPSRE-DGRPRNPYVKIYFLPDRSDkNKRRTKTVKKT 557  

                   lNPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgr..ddflGevs<-*
                   l P+WN+tF +++v+  ++ e++Lei+++D  r++ ++ +flGe+    
   mKIAA0751   558 LEPKWNQTFIYSpVHRREFRErMLEITLWDQARVREeeSEFLGEIL    603  

C2: domain 2 of 2, from 1158 to 1245: score 83.4, E = 4.7e-21
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkd.qkkkTkvikkt
                      L+V +i+A++L  k +++ ++ PYVkv+l++ +++  kkkTkv++kt
   mKIAA0751  1158    LEVEIIRARGLVVKPGSKTLPAPYVKVYLLDNGVCiAKKKTKVARKT 1204 

                   lNPvWNEtFtFevpppdlqetLeieVy.DydrfgrddflGevs<-*
                   l P + + + Fe   p++ + L+i V++Dy+r+ +  f+G ++   
   mKIAA0751  1205 LEPLYQQLLSFE-ESPQGRV-LQIIVWgDYGRMDHKSFMGVAQ    1245 

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