hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh01225/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA0745  ( 1078 res)   mbh01225

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
IBN_N    Importin-beta N-terminal domain                 60.0    5.2e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
IBN_N      1/1      24    90 ..     1    85 []    60.0  5.2e-14

Alignments of top-scoring domains:
IBN_N: domain 1 of 1, from 24 to 90: score 60.0, E = 5.2e-14
                   *->AEkqLeqlekqklPgFllaLlqIlansdtssdlqvRqlAalyLKNlI
                      AEk+L ++  +  P++l++++ +l   + +s+ ++++lAa +L +l+
   mKIAA0745    24    AEKALVEFTNS--PDCLSKCQLLL---ERGSSSYSQLLAATCLTKLV 65   

                   trhWsshrkqggyeqrwlslpeeekeqIknnllnllgs<-*
                   +r  +            + lp e++++I+n++ln+l++   
   mKIAA0745    66 SRT-N------------NPLPLEQRIDIRNYVLNYLAT    90   

//