hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/TIGRFAMs_HMM.LIB
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj05109/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0739  ( 1094 res)   mfj05109

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ae       ae: anion exchange protein                    1525.4          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ae         1/1     122  1042 ..     1   987 []  1525.4        0

Alignments of top-scoring domains:
ae: domain 1 of 1, from 122 to 1042: score 1525.4, E = 0
                   *->fvelneLlldsrnQEpeWrETARWikfEEdveeggerWGkPHVatLs
                      f+el+e  +  ++ + eW+ETARW+kfEEdve ggerW+kP VatLs
   mKIAA0739   122    FTELDEICMK-EGEDAEWKETARWLKFEEDVEDGGERWSKPYVATLS 167  

                   fhSLlELRrciakGavLLDLaatsLpgvankvvDqliysgqirpedRdev
                   +hSL+ELR+c+ +G+vLLD  a+s+  +  +++Dq++   ++    R +v
   mKIAA0739   168 LHSLFELRSCLINGSVLLDMRASSIEEISDLILDQQELLRDLSDSVRVKV 217  

                   lraLLlKHsHpseakklgaGGekGGflsravsqssiGktlshhhdaseie
                   ++aLL+KH H++e   +         ++ ++s + +Gk  s  h  ++  
   mKIAA0739   218 REALLKKHHHQNERRRNNL-------IPIVRSFAEVGKKQSDPHSMDR-- 258  

                   pkpenPvisgagaPllphdrltemqllsvpkdissrPeksklklkllkKl
                              g +  p+    ++  + v  + s   + sk +l+++kK+
   mKIAA0739   259 ----------DGQTVSPQSATNLEVKNGVNCEHSPV-DLSKVDLHFMKKI 297  

                   PedaEAtlVLVGevdFLekPalAFVRLkeAveLeavlEVPVPvRFlFvLL
                   P +aEA++VLVGevd L++P++AFVRL+ Av+L +++EVP+P+RFlF+LL
   mKIAA0739   298 PTGAEASNVLVGEVDTLDRPIVAFVRLSPAVLLSGLTEVPIPTRFLFILL 347  

                   GPsgpgvdYhEiGRAiATLMsDrvFhdaAYlAddRddLLagIdeFLDcsi
                   GP g+g++YhEiGR++AT M+D++Fhd+AY+A++RddLLagIdeFLD+++
   mKIAA0739   348 GPVGKGQQYHEIGRSMATIMTDEIFHDVAYKAKERDDLLAGIDEFLDQVT 397  

                   VLPPtEvdseirLepliplQrellRkRyeqpstvrgpenvtvgggleeak
                   VLPP+E+d+ ir+ep++ ++++++Rk      + ++ +nv   +  ++  
   mKIAA0739   398 VLPPGEWDPSIRIEPPKNVPSQEKRK-----MPGVPNGNVCHIEPEPH-- 440  

                   ekaLedggsegphgDDdpLqRTGrlFGGLIrDIkRRYPhYlSDftDALnp
                        +g+s gp     +L RTGrlFGGL++D+kR++P Y SD +DAL++
   mKIAA0739   441 -----GGHS-GP-----ELERTGRLFGGLVLDVKRKAPWYWSDYRDALSL 479  

                   QcLAAViFIYFAALSPAITFGGLLGEKTenmmGVsElllSTAVqGviFaL
                   QcLA+ +F Y A +SP ITFGGLLGE+Te+++ + E+l++ +  G+ ++L
   mKIAA0739   480 QCLASFLFLYCACMSPVITFGGLLGEATEGRISAIESLFGASMTGIAYSL 529  

                   laAQPLLVvGFSGPLLVFEeafFsFCksngLEYlvGRvWiGlWlvllvll
                   +a+QPL+++G++GP+LVFE ++F+FCk+  L Yl+ R+ iGlW+++l+ +
   mKIAA0739   530 FAGQPLTILGSTGPVLVFEKILFKFCKDYALSYLSLRALIGLWTAFLCIV 579  

                   lVAtEGSfLVryiSRFTQEIFSfLISLIFIYETFsKLiKIfqehPiisyL
                   lVAt++S LV yi+RFT+E F++LI  IFIYE++ KLi +++ +Pi   +
   mKIAA0739   580 LVATDASSLVCYITRFTEEAFASLICIIFIYEAIEKLIHLAETYPIHMHS 629  

                   qqfYetlfsCscvppkpskpsvsndttlArevlkstsltday...nd...
                   q    +l  C cv p   +p+  n              t  y ++++   
   mKIAA0739   630 QLDHLSLYYCRCVLP--ENPN--NH-------------TLQYwkdHNila 662  

                   ttiDytallekdcskiggslggnkcra....lPNtALLSLvLmlGTFflA
                   + + ++ l + +c+ + g++ g  c  +++  P+ +  S +L++ TF  +
   mKIAA0739   663 AEVNWANLTVSECQEMHGEFMGSACGHhgpyTPDVLFWSCILFFATFIVS 712  

                   mfLRKFKNSryfPGkvRRlIGDFGVpISIliMvlVDifIeDtyTQKLsVP
                    +L+ FK+SryfP++vR +++DF+V + I+ Mv+ D++I+ +  +KL VP
   mKIAA0739   713 STLKTFKTSRYFPTRVRSMVSDFAVFLTIFTMVVLDFLIG-VPSPKLQVP 761  

                   sglkVTnpnaRGWFIpPLGentpFPwWmmvAaalPALLVfILIFlEtQIT
                     +k+T  + RGWFI+P G n   PwW+  Aa++PALL +ILIF+++QIT
   mKIAA0739   762 NVFKPTRDD-RGWFINPIGPN---PWWTVIAAIIPALLCTILIFMDQQIT 807  

                   TLIVSkkERKLvKGSGFHLDLLlvvamggiaaLfGLPWLsAATVrSvTHa
                   ++I+++kE+KL+KG+G+HLDLL+v++m g+++ +GLPW +AATV+S+TH+
   mKIAA0739   808 AVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMGLPWFVAATVLSITHV 857  

                   NALTVmskasaPGekaqIqeVrEQRvtGlLVavLvGLSiLmepILkrIPL
                   N+L+ +s++saPGe++++++ rEQRvtGl+++vL G S++m+++Lk+IP+
   mKIAA0739   858 NSLKLESECSAPGEQPKFLGIREQRVTGLMIFVLMGCSVFMTAVLKFIPM 907  

                   aVLFGIFLYMGVTSLsGIQLfDRllLLlmPpKYhPdvpYvrrVktwRmHL
                   +VL+G+FLYMGV+SL GIQ+fDRl+L  mP+K++Pd++Y+r+V+++++HL
   mKIAA0739   908 PVLYGVFLYMGVSSLQGIQFFDRLKLFGMPAKHQPDFIYLRHVPLRKVHL 957  

                   FTliQilCLALLWvVKStkaASLafPfvLiLtVPLRrlllprlFterELk
                   FTl Q+ CL LLWv+K + +A++ fP + +++V +R++++ + F+ rEL+
   mKIAA0739   958 FTLVQLTCLVLLWVIKAS-PAAIVFPMMVLALVFVRKVMD-LCFSKRELS 1005 

                   cLDDviPekdkkKkeDAkvkfdEekveldsdGeDeyntyaeKveaEvpmP
                    LDD +Pe  kkK +DAk+k +E       + e + +     +    + P
   mKIAA0739  1006 WLDDLMPESKKKKLDDAKKKEEE-------EAEKMLD-----IGG-DKFP 1042 

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   mKIAA0739     -     -    

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