hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mph/mph01547/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0724 ( 1064 res) mph01547 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IBN_N Importin-beta N-terminal domain 35.5 1.2e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IBN_N 1/1 145 211 .. 1 85 [] 35.5 1.2e-06 Alignments of top-scoring domains: IBN_N: domain 1 of 1, from 145 to 211: score 35.5, E = 1.2e-06 *->AEkqLeqlekqklPgFllaLlqIlansdtssdlqvRqlAalyLKNlI A+k+L q++ + P+++ + +q+l ++ + +++++++a+ L+ +I mKIAA0724 145 AQKWLMQAQVS--PQAWHFSWQLL---QPDKVPEIQYFGASALHIKI 186 trhWsshrkqggyeqrwlslpeeekeqIknnllnllgs<-* +r+Ws +p ++ e++k +l + + mKIAA0724 187 SRYWS-------------DIPTDQYESLKAQLFTQITR 211 //