hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/smart.HMMs Sequence file: /cdna4/rodent/full/goal/mbg/mbg09316/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0722 ( 1004 res) mbg09316 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- S_TKc Serine/Threonine protein kinases, catalytic 242.4 3.7e-68 1 TyrKc Tyrosine kinase, catalytic domain 27.9 7.3e-13 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- S_TKc 1/1 3 231 .. 1 231 [] 242.4 3.7e-68 TyrKc 1/1 3 231 .. 1 280 [] 27.9 7.3e-13 Alignments of top-scoring domains: S_TKc: domain 1 of 1, from 3 to 231: score 242.4, E = 3.7e-68 *->YellkklGkGaFGkVylardkktgrlvAiKvikerilrEikiLkk.d k la+ + +EikiLk+ + mKIAA0722 3 -------------KKNLAKSQT------------LLGKEIKILKElK 24 HPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrrglrkvlsE. H+NIV Lyd+ e +++ylVmEyc+G GdL d+l+ +++ lsE+ mKIAA0722 25 HENIVALYDFQEMaNSVYLVMEYCNG--GDLADYLHTMRT------LSEd 66 earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds...........hvKl ++r +++Qi+ a+ LHs+gIiHRDLKP+NiLL+++++++ ++++ +vK+ mKIAA0722 67 TVRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNpggrranpsniRVKI 116 aDFGlArql......ttfvGTpeYmAPEvl...gYgkpavDiWSlGcily aDFG+Ar l+++ t++G+p YmAPEv+ +++Y++ ++D WS+G i+y mKIAA0722 117 ADFGFARYLqsnmmaATLCGSPMYMAPEVImsqHYDG-KADLWSIGTIVY 165 ElltGkpPFp.....qldlifkkig..........SpeakdLikklLvkd +ltGk PF+ +++++l l ++k ++ + ++++S ++++L+ lL+++ mKIAA0722 166 QCLTGKAPFQasspqDLRLFYEKNKtlvpaipretSAPLRQLLLALLQRN 215 PekRlta.eaLedeldikaHPff<-* ++R+ +e ++ HPf+ mKIAA0722 216 HKDRMDFdEFFH-------HPFL 231 TyrKc: domain 1 of 1, from 3 to 231: score 27.9, E = 7.3e-13 *->ltlgkkLGeGaFGeVykGtlkieVAVKtLkedakeeFlrEakiMkkl K+ + ++ + +E+ki+k+l mKIAA0722 3 --------------------------KKNLAKSQTLLGKEIKILKEL 23 GgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldyLrknrpkl kH+NiV+L+ +++vmEy+ gGdL dyL+ r l mKIAA0722 24 --KHENIVALYDFQEMA-------NSVYLVMEYCNGGDLADYLHTMRT-L 63 slsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk.........v s ++ f QIA M+ L+sk+++HRDL N+L++++++++ ++++ + mKIAA0722 64 SEDTVRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNPGgrranpsniR 113 vKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdg vKI+DFG +R+l + + ++ ++ mAPE+++ mKIAA0722 114 VKIADFGFARYLQSN--------MMAATLCGSPM------YMAPEVIMSQ 149 kFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRl. + k D WS G + +t G+ P s+++++ + +k + l mKIAA0722 150 HYDGKADLWSIGTIVYQCLT-GKAPFQA-----SSPQDLRLFYEKNKTLv 193 .pkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-* + +P + ++ l +l l +++ +dR F e ++ +l mKIAA0722 194 pAIPRE--------TSAPLRQLLLALLQRNHKDRMDFDEFfhHPFL 231 //