hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj08144/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0721  ( 404 res)   mfj08144

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
NAP      Nucleosome assembly protein (NAP)               74.4    2.4e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
NAP        1/1     191   381 ..     1   293 []    74.4  2.4e-18

Alignments of top-scoring domains:
NAP: domain 1 of 1, from 191 to 381: score 74.4, E = 2.4e-18
                   *->keRieaLKnlQvehdelEakFyeEvlkLEqKYaklYqPlfeKRreII
                       +  ++L ++  e+ +++a++ + +l LE+K+  ++    ++R    
   mKIAA0721   191    INCMDSLEAIDQELSNVNAQADRAFLQLERKFGRMRRLHMQRR---- 233  

                   nGvvEPteeeiewkseeeesleEeeelvdEDgelaeeekakeaveeekee
                                                           +  +      
   mKIAA0721   234 ----------------------------------------SFII------ 237  

                   eeEdpKGIPnFWLTalkNvdlvsemitEeDEpiLkyLkDIkvkesedGep
                          IP+FW+Ta++N++++s+mi   DE+  +y   ++v+e++  ++
   mKIAA0721   238 -----QNIPGFWVTAFRNHPQLSPMISGQDEDMMRYMINLEVEELKQ-PR 281  

                   sGFkLeFhFDsaNpYFtNkVLTKtYhlkseldpsDPfsFegpeiekaeGc
                    G k  F F s NpYF N+ L K+Y  +            ++  + + ++
   mKIAA0721   282 VGCKFKFIFQS-NPYFRNEGLVKEYERR-----------SSGR-VVSLST 318  

                   eIdWkkgKnNlTvktikKKQkhKgrgtvRtitktvpndSFFNFFsPpkvp
                   +I W  g     +  i    ++++ +t           SFFN+Fs++ + 
   mKIAA0721   319 PIRWHRGQE--PQAHIH---RNREGNTI---------PSFFNWFSDHSLL 354  

                   dEdeDqeeeldEDleelLelDyeIGeviRDrIIPrAVlyFtgeaie<-*
                   +                    + I+e i+  ++ ++++y+++ +     
   mKIAA0721   355 E-------------------FDRIAEIIKGELWSNPLQYYLMGDGP    381  

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