hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbf/mbf02832/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0720  ( 498 res)   mbf02832

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       PH domain                                       43.4    5.1e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      80   179 ..     1    92 []    43.4  5.1e-09

Alignments of top-scoring domains:
PH: domain 1 of 1, from 80 to 179: score 43.4, E = 5.1e-09
                   *->vikeGwLlkkggkkswkkRyfvLfndvLlyykdkk.....kkpkgsi
                      +  eG L++k+gk s  ++y++Lf+d Ll  k  k+ +++k  +  +
   mKIAA0720    80    LLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKAVKkaertKVIRPPL 126  

                   pLsgiqvekvpdnkrkncFeirt.dr.....etlllqaeseeerkeWvka
                    +++i ++++ d   + +F ++  ++ ++    +++qa+s+  +++Wv+ 
   mKIAA0720   127 LVDKIVCRELRD---PGSFLLIYlNEfhsavGAYTFQASSQALCRSWVDT 173  

                   iqsair<-*
                   i +a+    
   mKIAA0720   174 IYNAQN    179  

//