hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/TIGRFAMs_HMM.LIB Sequence file: /cdna4/rodent/full/goal/mbp/mbp06183/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0715 ( 889 res) mbp06183 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATPase-Plipid ATPase-Plipid: phospholipid-translocati 300.4 2.2e-86 1 ATPase_P-type ATPase_P-type: ATPase, P-type (transpor 235.5 7.8e-67 5 HAD-SF-IIB HAD-SF-IIB: HAD-superfamily hydrolase, -20.6 0.12 1 Cof-subfamily Cof-subfamily: Cof-like hydrolase -75.8 0.046 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATPase_P-type 1/5 172 215 .. 254 293 .. 15.7 0.0047 ATPase_P-type 2/5 234 255 .. 293 314 .. 11.1 0.077 ATPase_P-type 3/5 295 345 .. 316 366 .. 79.2 8.5e-20 HAD-SF-IIB 1/1 295 485 .. 1 261 [] -20.6 0.12 Cof-subfamily 1/1 295 512 .. 1 270 [] -75.8 0.046 ATPase_P-type 4/5 435 546 .. 360 466 .. 128.7 1e-34 ATPase_P-type 5/5 561 575 .. 464 478 .] -0.7 95 ATPase-Plipid 1/1 1 746 [. 1 1249 [] 300.4 2.2e-86 Alignments of top-scoring domains: ATPase_P-type: domain 1 of 5, from 172 to 215: score 15.7, E = 0.0047 *->kildvlpFtSerKrMsvivrdpdg....kyvKGApevilercsd<-* ++l++l F+S+rKrMsv+vr+p +++ +y+KGA++vi+ +++d mKIAA0715 172 DLLFTLGFDSVRKRMSVVVRHPLTdeiiVYTKGADSVIMDLLED 215 ATPase_P-type: domain 2 of 5, from 234 to 255: score 11.1, E = 0.077 *->dteehleelaseGlRtLavAyk<-* +t++hl+ +a++GlRtL++A+k mKIAA0715 234 RTQKHLDLYARDGLRTLCIAKK 255 ATPase_P-type: domain 3 of 5, from 295 to 345: score 79.2, E = 8.5e-20 *->ellGltaieDpLredvketIeeLkraGikvwMlTGDnveTAiaIAke +llG+t+ieD+L+e+v++tI++L++aGi +w+lTGD++eTA++IA++ mKIAA0715 295 TLLGATGIEDRLQEGVPDTIAALREAGIQLWVLTGDKQETAVNIAYS 341 cglf<-* c+l+ mKIAA0715 342 CKLL 345 HAD-SF-IIB: domain 1 of 1, from 295 to 485: score -20.6, E = 0.12 *->llffDlDGTLldpgpnpeahe...lseelieaLerLreklgvkvvlv TLl + +++l+e ++ ++ Lre+ g++++++ mKIAA0715 295 --------TLLGAT-----GIedrLQEGVPDTIAALREA-GIQLWVL 327 TGRslaeikellkqlnlpfkelpliaenGalifnngeilyieaqlpedva TG ++ + +++ + l +++ ++++ n+e + +++ mKIAA0715 328 TGDKQETAVNIAYSCKL-------LDQTDTVYSINTENQET-----CES- 364 efllseekelkeieailkslseleryvkrvLgtfvedkalavaihyaglk +l + +++k++ + ++ + ++ +++ ++ ++ a+a + mKIAA0715 365 -ILNCTLEDIKRFHEPQQPAR-KLCGHRIP-PKMPSVNSGAMAPEIG--- 408 peeLVvkllgqelkskllerlekigirfvgvkdekdleleailsrsnpla l +++ + f g+++ k+lel+++ mKIAA0715 409 ----------------LVIDGKTLNAIFQGKLENKFLELTQY-------- 434 lqkegktllevlplagvdKgsAlqalleelnkrsddlkkdeilafGDkTy + +l ++ + +K + ++ + ++l + +l +GD mKIAA0715 435 ----CRSVLCCRS-TPLQKSMIVKLVRDKLSVM--------TLSIGD--- 468 sgNDeemfevaglavav<-* ++ND++m+++a++++++ mKIAA0715 469 GANDVSMIQAADIGIGI 485 Cof-subfamily: domain 1 of 1, from 295 to 512: score -75.8, E = 0.046 *->lifiDlDGTLLnk..ddkeIspstkealaklrekGikvvlaTGRpla TLL ++ +++++ + +++a+lre+Gi++ + TG + mKIAA0715 295 --------TLLGAtgIEDRLQEGVPDTIAALREAGIQLWVLTGDKQE 333 gvykelkeilkelgldtdpyIsaNGgavidegggneilykkpLdl..dlv ++ +++ + ++ + dt + I ++++ + + + + +k+ + +++ + mKIAA0715 334 TAVNIAYSCKLLDQTDTVYSINTENQETCESILNCTLEDIKRFHEpqQPA 383 eellnflkkhgqeldvilysdsdsiyalkndpeyftifkkklaepklevv + l+++ + + + s + ++ a++ + i k l +++ + mKIAA0715 384 RKLCGHRIPPK------MPSVNSGAMAPEIG---LVIDGKTLNAIFQGKL 424 kn.lleddilkilllfldpedldkliealnkilefeenlsvnvssgedsi +n++le +++ ++l++ + l+k ++ + ++++lsv mKIAA0715 425 ENkFLELTQYCRSVLCCRSTPLQKSMIVKL----VRDKLSV--------- 461 EItakgvsKgsAlqslaeklgisledviAfGDgeNDieMLeaagyg.ivA + ++GDg ND++M++aa++g + mKIAA0715 462 -------------------------MTLSIGDGANDVSMIQAADIGiGIS 486 MgNAdeel....KalAdyvtdsgNdedGValal<-* +++++ + ++++a+A++ ++ l l mKIAA0715 487 GQEGMQAVmssdFAIARFSHLKK-------LLL 512 ATPase_P-type: domain 4 of 5, from 435 to 546: score 128.7, E = 1e-34 *->AkecglfARvsPeqKaeiVellq.krgaiVamiGDGaNDapALkaAD ++++ l++R++P+qK iV+l+++k ++++ iGDGaND+++++aAD mKIAA0715 435 CRSV-LCCRSTPLQKSMIVKLVRdKLSVMTLSIGDGANDVSMIQAAD 480 VGiaig......AkaaaDivltddnlslivlllvhGRwtykrikklilya +Gi+i+++++ +A++++D++++++ ++l +lllvhG+w+y+r++++++y+ mKIAA0715 481 IGIGISgqegmqAVMSSDFAIARF-SHLKKLLLVHGHWCYSRLARMVVYY 529 lyynliliillfvlsvi<-* +y+n++ + llf+++++ mKIAA0715 530 FYKNVCYVNLLFWYQFF 546 ATPase_P-type: domain 5 of 5, from 561 to 575: score -0.7, E = 95 *->svinllftslpalal<-* +++nl+ftslp+++ mKIAA0715 561 IFFNLFFTSLPPIIF 575 ATPase-Plipid: domain 1 of 1, from 1 to 746: score 300.4, E = 2.2e-86 *->FpsNkIsTtKYtvlTFlPKnLFeQFkrfANiYFLvvAllqqvPilsp L + + +v mKIAA0715 1 ---------------------------------LTICNSVMVS---- 10 tnrgtsivPLavVLlvtaiKeAiEDirRrkrDkevNNrltevLegveNeN t++ P r r+ +N+ l + Le+ mKIAA0715 11 ----TTTEP-----------------RKRVTTPPANKALGTSLEK----- 34 vltdnIsLWRklKKFIsytkedlseelKkkrisRKRHellvtkTVdtish i+ mKIAA0715 35 -------------------------------IQ----------------- 36 RsSLdSidayrlSvdydrleldeinleqganeasvvdrsltgssdgkFve + F + mKIAA0715 37 ---------------------------------------------QLFQR 41 ikWKdlrVGDIvKVkkderiPADllLLSSSepdGvCYVETaNLDGETNLK k LLS mKIAA0715 42 LK-----------------------LLS---------------------- 46 lRqAleeTqkmlteediknfsGeIecEqPnasLYsFqGnlkidgkakskI l q+ ++T+ ++ + g mKIAA0715 47 LSQSFSSTA---PSD-------------------------TDLG------ 62 rqlPLspdNiLLRGctLrNTkwviGvVvYTGhDTKlmrNatkaGPsKRSr ++L+p N + mKIAA0715 63 --ESLGP-----------N----------------------LP------- 70 iEkelNflIiiLFllLivLclissvgagiysdadgkdldlirwYleldks i sd e+d++ mKIAA0715 71 ---------------------------TIDSD-------------EKDDT 80 eRPGGkdYeYrnaaangFfsfltalILFssLIPISLYVslElvKsvQAty + v + mKIAA0715 81 S--------------------------------------------VCS-- 84 FInsDlemYhektDtPasvRtSNLnEeLGQVeYiFSDKTGTLTqNiMeFk + +tD + + t+ mKIAA0715 85 --------GDCSTDGGYRSSTWE--------------------------- 99 KcsIaGvsYgSdgltevkdalrerkgskveeesakvakDknsmlnelkil +G gS++ t +l e+ + mKIAA0715 100 ----QGDILGSESGT----SLEEG---------------------LEA-- 118 ksnsqkapkgftFvdprLvkllktaknkpnakliqeFflaLAiCHtVvPe P+ mKIAA0715 119 ------------------------------------------------PT 120 vnddddpeKGeitYQAaSPDEaALVkaArdlGFvfieRtpksIsllieer + +d pe + Y+A+SPDEaALV aAr++ F++++Rtp ++++++ + mKIAA0715 121 LS-QDEPE---LCYEAESPDEAALVHAARAYSFTLVSRTPEQVTVRLP-Q 165 GkkGkkeekeYeiLnVlEFnSdRKRMSvIvRfPdgnPGDdgrilLlcKGA G + +++ +L l F+S RKRMSv+vR P + +i + KGA mKIAA0715 166 G-----ICLTFDLLFTLGFDSVRKRMSVVVRHPLTD-----EIIVYTKGA 205 DsVifkRLssssGsggn........qvieeTkeHLenyAsEGLRTLciAy DsVi L++ ++n + +++ + ++ T +HL yA++GLRTLciA mKIAA0715 206 DSVIMDLLED-PACESNidvekklkRIRARTQKHLDLYARDGLRTLCIAK 254 ReLseeEYeeWneeYneAstaLtedReekLdevAelIEkdLiLLGaTAIE + +ee+++ W + eA ++L+ +Ree+L e A +E L LLGaT+IE mKIAA0715 255 KVVDEEDFQRWASFRREAEASLD-NREELLMETAQHLENHLTLLGATGIE 303 DKLQeGVPetIElLreAGIKiWVLTGDKvETAINIGySCrLlsenMeliv D+LQeGVP+tI+ LreAGI +WVLTGDK+ETA NI+ySC+Ll++ ++ mKIAA0715 304 DRLQEGVPDTIAALREAGIQLWVLTGDKQETAVNIAYSCKLLDQTDTVYS 353 IkeesddIrelEdagdldatervveaaikkiLkeyfelegteeefnelkk I++e ++ +e+++ + i + + ++ l mKIAA0715 354 INTEN-----------QETCESILNCTLEDI----KRFHEPQQPARKLCG 388 dh..vps..........gnvALvIDGksLkyaLdeeDlekeFLqLAlkCk h+ +p+ ++ +++ + +LvIDGk+L+ ++ le +FL+L C+ mKIAA0715 389 -HriPPKmpsvnsgamaPEIGLVIDGKTLNAIFQGK-LENKFLELTQYCR 436 AViCCRVSPsQKAdVVkLVKkstGrlskiTLAIGDGANDVSMIQeADVGV +V+CCR++P+QK+ +VkLV++ +ls++TL+IGDGANDVSMIQ+AD+G+ mKIAA0715 437 SVLCCRSTPLQKSMIVKLVRD---KLSVMTLSIGDGANDVSMIQAADIGI 483 GIsGkEGmQAvMASDFAIgQFrFLekLLLVHGrWSYkRiskmIlYfFYKN GIsG+EGmQAvM+SDFAI+ F++L+kLLLVHG+W+Y R++ m+ Y FYKN mKIAA0715 484 GISGQEGMQAVMSSDFAIARFSHLKKLLLVHGHWCYSRLARMVVYYFYKN 533 lifalilFWYsfyngFsGqtlyedWymvlYNvfFTalPVivLGvfDqDvs + + lFWY+f+ gFsG+t +++W m ++N+fFT+lP+i+ Gv+D+Dvs mKIAA0715 534 VCYVNLLFWYQFFCGFSGSTMIDYWQMIFFNLFFTSLPPIIFGVLDKDVS 583 aslslryPqLYreGqkgkefstkvFwgwmldglyQSlviFffpilayklg a+++l P+LY+ Gq+ + ++ +Fw+ m d++yQSl++Ff+p+l+y++ mKIAA0715 584 AETLLALPELYKSGQNSECYNLPTFWVSMADAFYQSLICFFIPYLTYRGS 633 dfvssGevddfssvGvivfTalVvvvnlkiaLeinrWnwisliaiwgSiL d+ d G+ + T++ +++l+ a+e +W+ +++ gS L mKIAA0715 634 DI-------DVFTFGTPINTISLTTILLHQAMEMKTWTVLHGLVLLGSFL 676 vwlifvivyssifptlPadisrefykaakrvmstfgFWlvLlvivlisLL ++++ +y + + ++ ++ y++ +r +s + F+l l++++++LL mKIAA0715 677 MYFVVSLIYNATC--VTCNSPTNPYWVMERQLSDPTFYLICLLTPVVALL 724 PrFtykalqrlfrPtdyeiVqE<-* Pr+ + +lq ++ ++ + ++q mKIAA0715 725 PRYFLLSLQGTYGKSLISKAQK 746 //