hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpf/mpf00289/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0711  ( 634 res)   mpf00289

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BTB      Broad-Complex, Tramtrack and Bric a brac        66.6    3.2e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BTB        1/1     147   238 ..     1   114 []    66.6  3.2e-15

Alignments of top-scoring domains:
BTB: domain 1 of 1, from 147 to 238: score 66.6, E = 3.2e-15
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                       D+++ v g         ++++a  HkavLaa+   S+yF+a+ + +
   mKIAA0711   147    PDLVIEVAG---------RRLRA--HKAVLAAR---SDYFRARASRd 179  

                   .ieldDeallievspeaFralLnflYt..kldlpeedvenveelLelAdf
                      +++      vs++a+r+lL   Y+++   + ++   nv e+ + A++
   mKIAA0711   180 vLRVQG------VSFTALRLLLADAYSgrMAGVRPD---NVAEVVAGARR 220  

                   ldSYGqip.lvelCeefllknl<-*
                   l    q+p+ ++  +e++  +l   
   mKIAA0711   221 L----QLPgAAQRATEAMAPQL    238  

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