hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg07785/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0707  ( 561 res)   mbg07785

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
START    in StAR and phosphatidylcholine transfer pro   106.7    2.6e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
START      1/1     352   550 ..     1   248 []   106.7  2.6e-27

Alignments of top-scoring domains:
START: domain 1 of 1, from 352 to 550: score 106.7, E = 2.6e-27
                   *->evaeeaanellklaassekgWvlspetgeiengdevlsiledgqnpk
                      +v++ + n + ++ +  +++Wvls+     e+ +++l+ile++    
   mKIAA0707   352    QVYLSYYNVSSLKTLMAKDNWVLSV-----EISEVRLYILEED---- 389  

                   qglkvsgealravgvvpmvcaedlvaellddgeyrkeWdknfagivskae
                       + +++l++v+ v++ + ++l+ +l++++    eWdk+++    ++e
   mKIAA0707   390 ----FLSFHLEMVVNVDAAQVFQLLSDLRRRP----EWDKHYR----SVE 427  

                   vvevissgtGgnrngviyhyvaksvapgpvsPtRDfvfvRywreddeHRa
                   +v+++++++     ++++++++++     ++P +Dfv++ ++r++++   
   mKIAA0707   428 LVQQVDEDD-----AIYHVISPALSG--NTKP-QDFVILASRRKPCD--- 466  

                   lvdgsyvivsvSvthetspptGpssgvvRaellpsgllieplgngpekdd
                    ++++yvi+++Svt +t+ +   ++++ R+e+l+sg++++++g++     
   mKIAA0707   467 -NGDPYVIALRSVTLPTHHE---TPEYQRGETLCSGFCLWREGDQM---- 508  

                   vkskvtwvsqaDlkGwlPvvhwllrsliksglaefaktRDsvatlqksce
                     +kv ++ qa ++   +   +++ + ++   +ef +t  ++a+ + +  
   mKIAA0707   509 --TKVSYYNQATPG---F--LNYVTTNVSGLSSEFYNT--FKACESFLLD 549  

                   k<-*
                       
   mKIAA0707   550 N    550  

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