hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg07785/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0707  ( 561 res)   mbg07785

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
START    START domain                                   115.2    1.2e-30   1
4HBT     Thioesterase superfamily                        66.5    5.5e-16   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
4HBT       1/2      30   107 ..     1    74 []    19.3    0.075
4HBT       2/2     202   279 ..     1    74 []    47.2  3.7e-10
START      1/1     352   549 ..     1   251 []   115.2  1.2e-30

Alignments of top-scoring domains:
4HBT: domain 1 of 2, from 30 to 107: score 19.3, E = 0.075
                   *->gGvvhGGvylalaDeaagaaarslg....vvvvelnidFlrPvrlGd
                       G +  G +l+++D++a + a ++++ + v+++++ i F   + +G+
   mKIAA0707    30    RGELSIGQLLKWIDTTACLSAERHAgcpcVTASMDDIYFDHTISVGQ 76   

                   vltvearvvrlGrtsavvevevrredgrlla<-*
                   v+ ++a+v r+ ++s++v ++v++ed    +   
   mKIAA0707    77 VVNIKAKVNRAFNSSMEVGIQVVSEDLCSEK    107  

4HBT: domain 2 of 2, from 202 to 279: score 47.2, E = 3.7e-10
                   *->gGvvhGGvylalaDeaagaaarslg....vvvvelnidFlrPvrlGd
                      +G+ +GG ++a+++ +a++aa++l++ ++   +    +F+ P  +Gd
   mKIAA0707   202    QGNTFGGQIMAWMENVATIAASRLChahpTLKAIEMFHFRGPSQVGD 248  

                   vltvearvvrlGrtsavvevevrredgrlla<-*
                   +l+++a v ++ ++s++v v v +  ++  +   
   mKIAA0707   249 RLVLKAIVNNAFKHSMEVGVCVEAYRQEAET    279  

START: domain 1 of 1, from 352 to 549: score 115.2, E = 1.2e-30
                   *->elaeeaaqellkmakssepgWvlssetgreeengdeylqkfedgqvt
                      ++++++ ++  ++ +  +++Wvls+      e+ +++l+++e++   
   mKIAA0707   352    QVYLSYYNVSSLKTLMAKDNWVLSV------EISEVRLYILEED--- 389  

                   kppglkdegeasRavgvVpavlaellveellddneyrkeWdedfaciVSs
                         + ++++ +v++V+a+++++l+ +l+ ++    eWd++++    s
   mKIAA0707   390 ------FLSFHLEMVVNVDAAQVFQLLSDLRRRP----EWDKHYR----S 425  

                   aetvevissgeGGnrngalqlyvaklqapgplsPtRDfvfvRywrqdDdH
                   +e+v+++++++     +++++++++l     ++P +Dfv++ ++r+++d 
   mKIAA0707   426 VELVQQVDEDD-----AIYHVISPALSG--NTKP-QDFVILASRRKPCD- 466  

                   RFledgsyavvdvSvdseqpppeGpssgvvRaerlpSgcliqplgngpek
                      ++++y+++++Sv+ +++ +   ++++ R+e+l+Sg++++++g++   
   mKIAA0707   467 ---NGDPYVIALRSVTLPTHHE---TPEYQRGETLCSGFCLWREGDQM-- 508  

                   rlsrdVkskvtwvehaDlkgwlPfvhwvlrslvksgmafgakrwvatlqe
                          +kv ++ +a + g l     ++ + v+    ++ + ++++++ 
   mKIAA0707   509 -------TKVSYYNQATP-GFL----NYVTTNVSGLSSEFYN-TFKACES 545  

                   qcek<-*
                   +      
   mKIAA0707   546 FLLD    549  

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