hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg11653/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0704  ( 824 res)   mbg11653

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     51.4    1.2e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      83   179 ..     1    82 []    51.4  1.2e-10

Alignments of top-scoring domains:
PH: domain 1 of 1, from 83 to 179: score 51.4, E = 1.2e-10
                   *->vikeGwLlkks...k.swkkryfvLfngvLlyyksk......kpkgs
                      ++ +G+Llkk + ++++w+kr+f+L  g L y ks  + +++k+ g+
   mKIAA0704    83    PVQKGFLLKKRkwpLkGWHKRFFCLEKGILKYAKSQadiereKLHGC 129  

                   ipLsgcsvre.p...cFeivt.drtlllqAeseeereeWvealqsaiaka
                   i++     +++++++c+ + t+++ ++l+ +see ++eWv+ l+ +    
   mKIAA0704   130 IDVGLSVMSVkKsskCIDLDTeEHIYHLKVKSEELFDEWVSKLRHHRMYR 179  

                   <-*
                      
   mKIAA0704     -     -    

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