hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01635/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0695  ( 738 res)   mbg01635

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
CULLIN   Cullin                                         151.7    7.7e-41   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
CULLIN     1/1     442   561 ..     1   159 []   151.7  7.7e-41

Alignments of top-scoring domains:
CULLIN: domain 1 of 1, from 442 to 561: score 151.7, E = 7.7e-41
                   *->dkvlvlFkYiedKDVFekyYkkhLAKRLllnrSaSdDaEenmitkLK
                      dk++++F++i  KDVFe++Ykk+LAKRLl ++SaS+DaE++m++kLK
   mKIAA0695   442    DKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 488  

                   qecGyPaefTsKLegMFrDislSkdltqsFkdylannpgnaskksiDlsn
                                                  +y +n++     ++i+l+ 
   mKIAA0695   489 -------------------------------HYMQNQN---VPGNIELT- 503  

                   vrVLtsgyWPtystekikveinLPqeLskaleeFeeFYlakhsGRkLtWl
                   v++Lt gyWPty       e++LP+e++k+ e+F++FYl khsGRkL W+
   mKIAA0695   504 VNILTMGYWPTYVP----MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQ 549  

                   hslgsgevkanf<-*
                     lg++ +ka f   
   mKIAA0695   550 STLGHCVLKAEF    561  

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