hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg08120/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0690  ( 1258 res)   mbg08120

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
NUC173   NUC173 domain                                  416.9   1.9e-121   1
HEAT     HEAT repeat                                     31.2    2.4e-05   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/5     245   280 ..     1    36 []     4.1       64
HEAT       2/5     424   460 ..     1    36 []    13.2      3.4
NUC173     1/1     485   683 ..     1   204 []   416.9 1.9e-121
HEAT       3/5     780   816 ..     1    36 []     6.6       29
HEAT       4/5     866   902 ..     1    36 []     4.1       65
HEAT       5/5     951   987 ..     1    36 []     3.4       82

Alignments of top-scoring domains:
HEAT: domain 1 of 5, from 245 to 280: score 4.1, E = 64
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +l ++   ll+   +  p++R+aA   ++++++     
   mKIAA0690   245    PiTL-QVYHGLLSFTVHAKPKIRKAAQHGVCSVLKGS    280  

HEAT: domain 2 of 5, from 424 to 460: score 13.2, E = 3.4
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++l +++ + +++l +p++ V +aA ++L ++++ +   
   mKIAA0690   424    LgHLARFFGTAVTCLLSPHSQVAAAATQTLKEILKEC    460  

NUC173: domain 1 of 1, from 485 to 683: score 416.9, E = 1.9e-121
                   *->lcafiveelLsikfhaawkevLnvlsalFdklGkrsnPfLlkaLqil
                      +++  vee+L++kfhaaw+ vL++l+++F+++Gk+++P ++k+Lq+l
   mKIAA0690   485    MFR-AVEEGLTYKFHAAWSSVLQLLGVFFEACGKQAHPVMKKCLQSL 530  

                   gdlRtneeeffpgrkeldeaiGsAirAMGPeaVLkvlPLnlenpsdisld
                   +dlR ++  +fp++++ld+a+G+A+ +MGPe+VL+++PL +++ ++ +ld
   mKIAA0690   531 CDLRLSP--HFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEE-TLD 577  

                   pgRaWLLPlLRDnirnasLsfFkseflPLaekfeskikkLaqakesiqsK
                   ++R+WLLP++RD++r ++L+fF+++flPLa ++++k+++Laqa+  ++sK
   mKIAA0690   578 FPRSWLLPVIRDHVRETRLGFFTTYFLPLATTLKRKAMDLAQAGSTVESK 627  

                   iyqTlvdQlWsLLPgFCelPtDlvesFtdefArtLgnlLyervdLRttIC
                   iy+Tl++Q+W+LLPgFC++PtD+  sF+ ++ArtLg +++er+dLR t+C
   mKIAA0690   628 IYDTLQWQIWTLLPGFCTRPTDVAASFK-GLARTLGTAINERPDLRVTVC 676  

                   qALrvLv<-*
                   qALr+L+   
   mKIAA0690   677 QALRTLI    683  

HEAT: domain 3 of 5, from 780 to 816: score 6.6, E = 29
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e ++++l  ++   l++++  V++ A + L +++      
   mKIAA0690   780    EaAISKLYSTIRPYLESKVHGVQKKAYRVLEEVCASS    816  

HEAT: domain 4 of 5, from 866 to 902: score 4.1, E = 65
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e+++  l+p ++ + +  +   R++A+  L+++   +   
   mKIAA0690   866    EeFIAALIPEVILCTKEVSVGARKSAFTLLVEMGHAF    902  

HEAT: domain 5 of 5, from 951 to 987: score 3.4, E = 82
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++++ll+ ++ ll +   +V ++A+  +   + v+   
   mKIAA0690   951    TsTVEQLLENVCLLLASRTRDVVKSALGFIKVAVVVM    987  

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