hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mid/mid13080/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0685  ( 814 res)   mid13080

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SAPS     SIT4 phosphatase-associated protein            602.5   2.4e-177   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SAPS       1/1       1   398 [.     1   629 []   602.5 2.4e-177

Alignments of top-scoring domains:
SAPS: domain 1 of 1, from 1 to 398: score 602.5, E = 2.4e-177
                   *->necLLdrktdqlleFlkskdnfVdklLkHIgtsaIECLMDlLLrlis
                       +         ++ Flk+k++f+++lLkHIgtsa+   MDlLLrl+s
   mKIAA0685     1    LQ---------VIMFLKKKEKFISQLLKHIGTSAL---MDLLLRLVS 35   

                   tiDkpesrytgvieWLyeqnLiekLvdlLrpseydpldvqsnaadfLCai
                   +++++ +r + v++WL+e+++i+++v+l++p + d+ d+qsna++ LC+i
   mKIAA0685    36 CVEPVGLR-QEVLHWLNEEKIIQRIVALIHPHQ-DE-DRQSNASQALCDI 82   

                   iriSrdKLYIMnskldiqssigPNeLtrqLvSpetieqLldimlVEEGCP
                   ir++r      ++++++q++ +P++L+ +L+S++++eqLl++m+      
   mKIAA0685    83 IRLGR------DQGSQLQETVEPDPLLITLESQDCVEQLLKNMF------ 120  

                   AedeasPkggsaLvsgvsiiIeLirknnsdveYdtvnslrttLLQKeEie
                    +++++   +s+Lvsg ++++ L++++++ +e + v+s+++ L       
   mKIAA0685   121 -DGDQT---ESCLVSGMQVLLALLEPRRVGTE-GLVDSFSQGL------- 158  

                   thLiEERHYSYGLmRPCldnPPteRdPqiylgellegfLaprLpdFlqTL
                                          eR+  ++++++l+g+ +p L++F+q L
   mKIAA0685   159 -----------------------ERSH-SVSSSILRGI-EPWLKNFHQ-L 182  

                   LlkpeadgdklPLLeTtyGklePPLGfeRlKIcELIAeLLhcsnmallne
                   Ll+p+++++    ++Tt+G+le+PLG++Rl+  +L+A+LLh++++++++e
   mKIAA0685   183 LLNPPKKKA----ILTTIGVLEEPLGNARLHGARLMAALLHTNTPGINQE 228  

                   prGEdIvreRDklRdklfehdqeaesnarievkededdnddtvednneed
                                                                     
   mKIAA0685     - -------------------------------------------------- -    

                   knnnedandsndeeerkdkikkkvkddnlvstkvdseeseaepvdeeeed
                                                                     
   mKIAA0685     - -------------------------------------------------- -    

                   akdeddedDdadesfEipydsesieeklRslPvVGDfLKInLidtgvipr
                                                            L++++++++
   mKIAA0685   229 -----------------------------------------LCRLNTMDL 237  

                   iLDlFFeYPWNNFLHnvVediiqqiLngpmdndyNastevtdyftesp..
                   +LDlFF+Y+WNNFLH +Ve +i+ iL++  ++++ ++++++ ++++  ++
   mKIAA0685   238 LLDLFFKYTWNNFLHLQVELCIAAILSHAAREEQAEASGSDGKVEPLQgs 287  

                   tdqqeSeaTlnDldSppdsfLvkhLlqecdsdvfLiekIleaweecalag
                    d++  ++T     Spp +++v+hL+q+c+    L+++Ileawe++    
   mKIAA0685   288 GDGNGKLETTPSITSPPENTMVTHLFQKCC----LVQRILEAWEAN---- 329  

                   DsisdfilpgnkdsvaksgkkglRlGYMGHLTrIAeevvkftelypesni
                                 +++++++g+R+G+MGHLTrIA++vv++ e +p++ +
   mKIAA0685   330 --------------DHTQAAGGMRRGNMGHLTRIANAVVQNLEQGPVQAH 365  

                   qiqqllklsslledeeWeeyvedvLaeTrekynv<-*
                   +++++++l+++++  +We++ve++L eT+++++v   
   mKIAA0685   366 ISEVIRGLPADCR-GRWESFVEETLMETNRRNTV    398  

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