hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg02790/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0684  ( 1186 res)   mbg02790

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Ubox     Modified RING finger domain                     98.1      1e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Ubox       1/1    1115  1177 ..     1    72 []    98.1    1e-24

Alignments of top-scoring domains:
Ubox: domain 1 of 1, from 1115 to 1177: score 98.1, E = 1e-24
                   *->eFiCPIslevMeDPVilpsGKgqTyERraIekwlksgGrhgtcPvTg
                      eF++P++ ++M+DPV lpsG  ++++R+ I ++l++    +t+P+++
   mKIAA0684  1115    EFRDPLMDTLMTDPVRLPSG--TVMDRSIILRHLLN---SPTDPFNR 1156 

                   qpLpthedLiPnKtglalKslIqew<-*
                   q L t+++L P    ++lK++Iq+w   
   mKIAA0684  1157 QML-TESMLEPV---PELKEQIQAW    1177 

//