hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj01241/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0668  ( 739 res)   mfj01241

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Sad1_UNC Sad1 / UNC-like C-terminal                     252.7    5.1e-72   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Sad1_UNC   1/1     603   737 ..     1   147 []   252.7  5.1e-72

Alignments of top-scoring domains:
Sad1_UNC: domain 1 of 1, from 603 to 737: score 252.7, E = 5.1e-72
                   *->lnyeaksprvilqedkDkympgpCwsfkgsrGfvvieLsepIiveav
                      l+y+++sprvilq+d   ++pg+Cw+f+g++Gf v++Ls  I ++av
   mKIAA0668   603    LWYHSQSPRVILQPD---VHPGNCWAFQGPQGFAVVRLSARIRPTAV 646  

                   tLeHveksvspdGnfsSAPKdFeVsgserypdeesTeewvlLGeFtYdld
                   tLeHv+k++sp++++sSAPKdF+++g +++ ++e     +lLG+F Yd+d
   mKIAA0668   647 TLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQE----GTLLGTFAYDQD 692  

                   gknlQtFqlqnpCpyiekqswvkyVklrilSNyGnehYTClYrfRVhGts
                   g+++QtF +q + +++    +++ V+lril+N+G+++YTC+YrfRVhG++
   mKIAA0668   693 GEPIQTFYFQAS-KMA----TYQVVELRILTNWGHPEYTCIYRFRVHGEP 737  

                   <-*
                      
   mKIAA0668     -     -    

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