hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg08843/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0642  ( 1048 res)   mbg08843

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
GYF      GYF domain                                      98.2    1.6e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
GYF        1/1     292   347 ..     1    59 []    98.2  1.6e-25

Alignments of top-scoring domains:
GYF: domain 1 of 1, from 292 to 347: score 98.2, E = 1.6e-25
                   *->vlwlYkDpNkqgeiqGPFtasqMsqWyqaGYFtdslqvkrldeperi
                      ++w+YkDp  qgeiqG F +++M++W+qaGYFt+sl vkr++++ + 
   mKIAA0642   292    QKWYYKDP--QGEIQGSFNNQEMAEWFQAGYFTMSLLVKRACDESF- 335  

                   eplgdlkrligl<-*
                   +plgd+++++g+   
   mKIAA0642   336 QPLGDIMKMWGR    347  

//