hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpj/mpj04359/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0640  ( 591 res)   mpj04359

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       PH domain                                       86.8    4.4e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1     217   312 ..     1    92 []    86.8  4.4e-22

Alignments of top-scoring domains:
PH: domain 1 of 1, from 217 to 312: score 86.8, E = 4.4e-22
                   *->vikeGwLlkkg.gkkswkkRyfvLfndvLlyykdkk.kkpkgsipLs
                      v k+G+++kkg+++k+w +R+fvL+++ ++yy +++ k++kg i L+
   mKIAA0640   217    VLKQGYMMKKGhKRKNWTERWFVLKPNIISYYVSEDlKDKKGDILLD 263  

                   gi.qvekvpdn.krkncFeirt.dretlllqaeseeerkeWvkaiqsair
                   +   ve +pd +++k+ F i++ d+ t++++a++ + ++eW++ai s i+
   mKIAA0640   264 ENcCVESLPDKdGKKCLFLIKCfDK-TFEISASDKKKKQEWIQAIYSTIH 312  

                   <-*
                      
   mKIAA0640     -     -    

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