hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh01007/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0627  ( 1188 res)   mbh01007

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     58.3    1.6e-13   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/5       2    40 ..     1    36 []     0.0  2.4e+02
HEAT       2/5     124   160 ..     1    36 []    10.8      7.6
HEAT       3/5     710   746 ..     1    36 []     1.2  1.7e+02
HEAT       4/5     991  1027 ..     1    36 []    25.2   0.0015
HEAT       5/5    1109  1145 ..     1    36 []    23.5    0.005

Alignments of top-scoring domains:
HEAT: domain 1 of 5, from 2 to 40: score 0.0, E = 2.4e+02
                   *->e.lldellplllkllnDp..dpeVReaAaeaLgalaevl<-*
                      ++ l+e l+ + + l+D+++d++ R++A++ + +l+      
   mKIAA0627     2    SrELEETLNKIREILSDDkhDWDQRANALKKIRSLLVAG    40   

HEAT: domain 2 of 5, from 124 to 160: score 10.8, E = 7.6
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++++l+pl+ + +++++  VR+ ++e L  l++     
   mKIAA0627   124    HtHVPRLIPLITSNCTSKSVPVRRRSFEFLDLLLQEW    160  

HEAT: domain 3 of 5, from 710 to 746: score 1.2, E = 1.7e+02
                   *->e.lldellplllkllnDp.dpeVReaAaeaLgalaevl<-*
                      ++++   +  ++++ + p++++VR+aA + L +l e     
   mKIAA0627   710    SeTR-LAVSRVITWTTEPkSSDVRKAAQSVLISLFELN    746  

HEAT: domain 4 of 5, from 991 to 1027: score 25.2, E = 0.0015
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++ +++l lll+ l+D++p +R+ A++ L +++++    
   mKIAA0627   991    DeHFKTILLLLLETLGDKEPTIRALALKVLKEILRHQ    1027 

HEAT: domain 5 of 5, from 1109 to 1145: score 23.5, E = 0.005
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + ll+e++p l+++ + ++++VR+a++++L+a+  v+   
   mKIAA0627  1109    NmLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVI    1145 

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