hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm06204/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0617  ( 792 res)   mpm06204

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
CULLIN   Cullin                                         315.9    2.9e-90   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
CULLIN     1/1     437   587 ..     1   159 []   315.9  2.9e-90

Alignments of top-scoring domains:
CULLIN: domain 1 of 1, from 437 to 587: score 315.9, E = 2.9e-90
                   *->dkvlvlFkYiedKDVFekyYkkhLAKRLllnrSaSdDaEenmitkLK
                      dk++vlF+++++KDVFe+yYk+hLA+RLl+n+S+SdD+E+nmi+kLK
   mKIAA0617   437    DKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLK 483  

                   qecGyPaefTsKLegMFrDislSkdltqsFkdylannpgnaskksiDlsn
                   +ecG+  +fTsKLegMFrD+s+S++++++F+++l++++  +s +++Dl+ 
   mKIAA0617   484 TECGC--QFTSKLEGMFRDMSISNTTMDEFRQHLQATG--VSLGGVDLT- 528  

                   vrVLtsgyWPtystekikveinLPqeLskaleeFeeFYlakhsGRkLtWl
                   vrVLt+gyWPt+s++   +++n+P+ +++a+e+F++FYlakhsGR+Lt +
   mKIAA0617   529 VRVLTTGYWPTQSAT---PKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQ 575  

                   hslgsgevkanf<-*
                   h++gs++++a+f   
   mKIAA0617   576 HHMGSADLNATF    587  

//