hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10347/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0614  ( 1159 res)   mbg10347

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus    13.8    7.2e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECTc      1/1     789  1153 ..     1   407 []    13.8  7.2e-11

Alignments of top-scoring domains:
HECTc: domain 1 of 1, from 789 to 1153: score 13.8, E = 7.2e-11
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                        s+ d        + I+f       gEe    +G +r F+  ++ke
   mKIAA0614   789    LASGGDPTYA----FNIRF------TGEEVHGTSGSFRHFLWQVCKE 825  

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                   l+   ++ L+   p++         +  +  + ++  +++++ +e+  + 
   mKIAA0614   826 LQSS-SLSLLLLCPSSA--------VNKNK-GKYILTPSPITYGEE--Q- 862  

                   yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhDleslDP
                   + +f+G +lG+A++    l+l +  +F+K L g+p   d++ +Dl + D 
   mKIAA0614   863 LLHFLGQLLGIAIRADVPLPLDLLPSFWKTLVGEP--LDPD-QDLQEADI 909  

                   elyksLvwLilvrrKleleeDlseeskslenditeveldmaLtFsivles
                     y+ +++++                    nd++e  l+ aL+ +i  + 
   mKIAA0614   910 LTYNYVKKFE------------------SINDESE--LE-ALCAEIASQH 938  

                   dfge.................vkvvELkpGGsnipVTeeNkkEYVhlvie
                   +  e+++++++  + +  + ++++vEL+  G+ ipV  eNk  Y   +i 
   mKIAA0614   939 LATEspegpkpccrftyltmtGEEVELCSRGRHIPVAWENKDIY-AAAIR 987  

                   yrlnkgvekq..leAFreGFseVipeelLrylFdeeELeLLicGleeeid
                     + ++ + ++ + A+r G+  +ip+ lL   + + E eL  cGl+  i+
   mKIAA0614   988 SLRLRELQNMecVTAVRAGLGSIIPLQLLT-TLSPLEMELRTCGLP-YIN 1035 

                   vddLksnTeyrggYtensqtirfkkwFWevvesFtneerrkLLqFVTGss
                   ++ Lk +T y  g  e++q i   ++FW ++e+Ft+ee  k+ +F     
   mKIAA0614  1036 LEFLKAHTMYQVGLMETDQHI---ELFWGALEMFTQEELCKFIKFACNQE 1082 

                   rlPASvgG........FaaLspsNGpqkFtIrkagsetlsdddrLPtAhT
                   r+P  +  + ++++++ a  +p      + I + +     +d+r+ ++ T
   mKIAA0614  1083 RIP--FTCpckdggpdTAHVPP----YPMKIAPPDGTAGPPDSRYIRVET 1126 

                   CfNrLkLPpYsSkeiLreKLLlAInegRiggeGFgls<-*
                   C++++kLP YsS e++ eKL+ AI +          +   
   mKIAA0614  1127 CMFMIKLPQYSSLETMLEKLRCAIHY----------R    1153 

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