hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg01890/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0609  ( 740 res)   mbg01890

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
Glyco_transf_8 Glycosyl transferase family 8             12.7      2e-06   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
Glyco_transf_8   1/1     124   374 ..     1   345 []    12.7    2e-06

Alignments of top-scoring domains:
Glyco_transf_8: domain 1 of 1, from 124 to 374: score 12.7, E = 2e-06
                   *->pivlalddnYLDplyHYaLfSDNvlgagvlikSlllhnsdpekvfhf
                      +  +++++n               + +++l+kS+l h          
   mKIAA0609   124    VAIVCAGYNA-------------SRDVVTLVKSVLFHRR-------- 149  

                   lskhvfhivTDknyamfpwlhlkfyiltddvseenieklnelgsqysevd
                                        l f+++ d++ e+ ++ l  +++ +  v 
   mKIAA0609   150 -------------------NPLHFHLIADSIAEQILATL-FQTWMVPAV- 178  

                   riefsdiemlekyprnsinsylidckllkslflnlk.llkkhwsllnyaR
                   r++f +   l++                       + ++k +  ++ + +
   mKIAA0609   179 RVDFYNADELKSEVS--------------------WiPNKHYSGIYGLMK 208  

                   lflpdlf.pqydKvlYLDaDiiVllgdldeLfdidlggkvlaAVeDydyv
                   l l + ++ ++++v+ LD Di +   d++eL++                v
   mKIAA0609   209 LVLTKTLpANLERVIVLDTDITF-ATDIAELWA----------------V 241  

                   cDcfsekcfe.chanfekyfdrypefkealslslggppry.pcyFNaGvl
                   +  f+ +   ++  n++  +   ++++++       p+ + + ++N+Gv+
   mKIAA0609   242 FHKFKGQQVLgLVENQSDWYLGNLWKNHR-------PWPAlGRGYNTGVI 284  

                   vinlkkWreenitek.liewmlnkkgrrtllklgDQdiLNivFkdWhlrL
                   ++ l+k r+++ ++   ++   ++  +   + l+DQdi+N+v+k     +
   mKIAA0609   285 LLLLDKLRKMKWEQMwRLTA-ERELMGMLSTSLADQDIFNAVIK----QN 329  

                   .gkvkfLppryNvqglgyfkekdyskkkyrklipeepkviHYiGaptKPW
                   +  v++Lp+++Nvq +         ++ ++ ++  + kviH++  p K  
   mKIAA0609   330 pFLVYQLPCFWNVQLSDH-----TRSEQCYRDV-SDLKVIHWNS-PKK-- 370  

                   ldla<-*
                   l+ +   
   mKIAA0609   371 LRVK    374  

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