hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj39041/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0608  ( 738 res)   mfj39041

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TBC      Domain in Tre-2, BUB2p, and Cdc16p. Probable   196.6    2.3e-54   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TBC        1/1     444   678 ..     1   310 []   196.6  2.3e-54

Alignments of top-scoring domains:
TBC: domain 1 of 1, from 444 to 678: score 196.6, E = 2.3e-54
                   *->vrkGvppslRgeVWklLlnaqpmntsnweraqkakdaesqflv.vnd
                      +++G pps+Rg+VW l  ++  + t +              l + ++
   mKIAA0608   444    WWQGLPPSVRGKVWSLAVGNELNITPE--------------LYeIFL 476  

                   drlkdeYsrllnqtapkdkstdleqavssnn.kdfeeqPLsiwnffqdnd
                   +r k+++ ++ +  +++d  +      s++ + ++ e             
   mKIAA0608   477 SRAKERWKSFSESSSENDTEG-----LSVADrEASLEL------------ 509  

                   sldqIekDlkRTfpelsfFqfrsrdnqkevllddengpgqesLrrvLkaY
                       I +D++RTfp l  Fq+              +gp+++ L+ +L aY
   mKIAA0608   510 ----IKLDISRTFPSLYIFQK--------------GGPYHDVLHSILGAY 541  

                   slynpehivgYcQGmnflaapLLlvmpiydEedAFwcfvkLmerylpnfl
                     y+p+  vgY+QGm+f+aa+L l++   +E+dAF++f +L++ +++ ++
   mKIAA0608   542 TCYRPD--VGYVQGMSFIAAVLILNL---EEADAFIAFANLLNKPCQLAF 586  

                   fkdtnnfytpdlsglqadqlvldslleeylPeLykHLqeqdkqskkkhvd
                   f       + d s + + + +++ ++ee l +L+ H++++          
   mKIAA0608   587 F-------RVDHSMMLKYFATFEVFFEENLSKLFLHFKSY---------- 619  

                   kleidpslyalrWfLtlFarelPledvlRiwDvlfaellrlgseflfkia
                      ++p++y++ W++tl+++ lPl++++R+wDv+  +    g+eflf+++
   mKIAA0608   620 --NLTPDIYLIDWIFTLYSKSLPLDLACRVWDVFCRD----GEEFLFRTG 663  

                   laiLklnedkllkld<-*
                   l iL+l+ed+ll++d   
   mKIAA0608   664 LGILRLYEDILLQMD    678  

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