hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm05364/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0591  ( 1162 res)   mpm05364

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Kinesin  Kinesin motor domain                           593.0   1.8e-174   1
FHA      FHA domain                                      48.0    2.1e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Kinesin    1/1      23   361 ..     1   424 []   593.0 1.8e-174
FHA        1/1     522   593 ..     1    94 []    48.0  2.1e-10

Alignments of top-scoring domains:
Kinesin: domain 1 of 1, from 23 to 361: score 593.0, E = 1.8e-174
                   *->RvRPlnerEksrgs.vvvnv..sedvessrltn.gkkktFtFDkVFd
                      RvRP+n+rE+s+ s++++++++ ++ +++++++++ +k+F+FD+ ++
   mKIAA0591    23    RVRPFNSRETSKESkCIIQMqgNSTSIINPKNPkEAPKSFSFDYSYW 69   

                   peatQegsse.p.YAsqefvyesvakPlvesvleGyNgtiFAYGQTGSGK
                   ++++     e+p +Asq  vy++++k+++ +++eGyN++iFAYGQTG+GK
   mKIAA0591    70 SHTS----PEdPcFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGK 115  

                   TYTMeGppesdkesgnptddsytlpeeepGiiPRaledlFerieerkerk
                   +YTM+G+ e                e+++GiiP  +e+lFe+i++     
   mKIAA0591   116 SYTMMGKQE----------------ESQAGIIPQLCEELFEKIND----- 144  

                   pvfKPklnekgwellnsqetligvsfdrglssdlyvndlefsvkvSylEI
                        + ne                            ++++sv+vSy+EI
   mKIAA0591   145 -----NCNE----------------------------EMSYSVEVSYMEI 161  

                   YNEkirDLLspsppqrgspskanekkkkkpLrireDpkrGgkmdgvyVeG
                   Y+E++rDLL+p+             +k + Lr+re+p  G     +yVe+
   mKIAA0591   162 YCERVRDLLNPK-------------NKGN-LRVREHPLLG-----PYVED 192  

                   LteveVssaeevlelLelGnknRtvasTkmNerSSRSHaiFtitveqrnt
                   L+   V+s+ ++  l++ Gnk Rtva+T+mNe+SSRSHa+Fti  +q+  
   mKIAA0591   193 LSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQ 242  

                   dstgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEa
                   d++++ +t+         +vsk++LVDLAGSERa+ Tg   A g RLkE+
   mKIAA0591   243 DPETNLSTE---------KVSKISLVDLAGSERADSTG---AKGTRLKEG 280  

                   anINkSLsaLGnVInALadkq....kssHiPYRDSKLTrLLqDSLGGGDN
                   anINkSL++LG+VI+ALa+ +++++k ++iPYRDS+LT+LL++ LGG  N
   mKIAA0591   281 ANINKSLTTLGKVISALAEVSkkkkKTDFIPYRDSVLTWLLRENLGG--N 328  

                   sKTlMIaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   s+T+M+a  SP++     ny+ETLsTLr+A+RAK+Ik   
   mKIAA0591   329 SRTAMVAALSPADI----NYDETLSTLRYADRAKQIK    361  

FHA: domain 1 of 1, from 522 to 593: score 48.0, E = 2.1e-10
                   *->vtiGRdsdsddilldddqdislsg.siSrrHatieykdggvslelaf
                      +++G       ++ ++ qdi+lsg +i  +H++++    + +  +  
   mKIAA0591   522    TRVGQ------ADAERRQDIVLSGaHIKEEHCLFRSERSNTGEVIV- 561  

                   rlaqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-
                             +l++++ +     t+vNgkr+    pv+L+sG++i +G  
   mKIAA0591   562 ----------TLEPCERSE----TYVNGKRV--AHPVQLRSGNRIIMG   593  

                   *
                    
   mKIAA0591     -   -    

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