hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mfj/mfj20194/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0589 ( 705 res) mfj20194 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PIP5K Phosphatidylinositol-4-phosphate 5-Kinase 593.4 1.4e-174 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PIP5K 1/1 175 461 .. 1 361 [] 593.4 1.4e-174 Alignments of top-scoring domains: PIP5K: domain 1 of 1, from 175 to 461: score 593.4, E = 1.4e-174 *->lSlCsspllrElsspGkSGSrFYlsqDdrFiIKtvkksEvkvLlkmL +SlC++pl+ Els+pG+SGS+FY+++Dd+FiIKtv+++E+++L+k+L mKIAA0589 175 YSLCNEPLI-ELSNPGASGSVFYVTSDDEFIIKTVMHKEAEFLQKLL 220 PgYYehinqnpgQkrnTLLpKFfGlyrvkvkgsvgnkekkkkirfvVMnN PgYY+++nqnp +TLLpKF+Gly+v+++ g k+ir+vVMnN mKIAA0589 221 PGYYMNLNQNP----RTLLPKFYGLYCVQSG---G-----KNIRVVVMNN 258 LFpselkihrkYDLKGStygReaskkekrLaeekelpTLKDlDfleegqk ++p+ +k+h k+DLKGSty+R+askkek ek lpT+KDlDf++++++ mKIAA0589 259 VLPRVVKMHLKFDLKGSTYKRRASKKEK----EKSLPTYKDLDFMQDMPE 304 glyldslskkaLlkqikrDCefLeslkIMDYSLLvGiHdidrgcqgseee gl lds+++ aL+k+++rDC++Les+kIMDYSLL+G+H+id++ ++e+ mKIAA0589 305 GLLLDSDTFGALVKTLQRDCLVLESFKIMDYSLLLGVHNIDQQ---ERER 351 eeesydkseaeegsddeepekqgktlsaspdrsSvamasckpmRgsvlse + e a++++d+++p +q+ mKIAA0589 352 QAE-----GAQSKADEKRPVAQK--------------------------- 369 ysltstsvesilasfrnlgriefgenipagairarrqreedgeesgkasl +l+st++esi++++ +++ ie++ +++g+i+a + mKIAA0589 370 -ALYSTAMESIQGGAARGEAIETD--DTMGGIPAVN-------------- 402 efeegedlvLYlGIIDILqdYdlkKKlEHawKSlqhdgGkGktISvvnPe ++ge+l+L++GIIDILq+Y++ KKlEH+wK+l+hdg +t+Sv++P+ mKIAA0589 403 --GRGERLLLHIGIIDILQSYRFIKKLEHTWKALVHDG---DTVSVHRPS 447 fYskRFldFmskif<-* fY++RF++Fms+++ mKIAA0589 448 FYAERFFKFMSSTV 461 //