hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg05630/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0567  ( 979 res)   mbg05630

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
Dynamin_N Dynamin family                                207.6    1.9e-58   1
MMR_HSR1  GTPase of unknown function                      5.6     0.0021   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
Dynamin_N   1/1     335   513 ..     1   217 []   207.6  1.9e-58
MMR_HSR1    1/1     333   514 ..     1   140 []     5.6   0.0021

Alignments of top-scoring domains:
Dynamin_N: domain 1 of 1, from 335 to 513: score 207.6, E = 1.9e-58
                   *->IaVvGdqSsGKSSvLnaLlGrdfnLPhrgpgEptTrrplvTlqlges
                      ++VvGdqS+GK+SvL+ + ++++ +P rg+gE++Tr p++ ++l+e 
   mKIAA0567   335    VVVVGDQSAGKTSVLEMIAQARI-FP-RGSGEMMTRSPVK-VTLSEG 378  

                   peaieivsipgavkveykdflhplkkfedfsevreeieketdriagknkg
                   p  ++     +  k++ ++f+  l+k+ed+ ++r+eie ++ ++  ++  
   mKIAA0567   379 PH-HV-----ALFKDSSREFD--LTKEEDLAALRHEIELRMRKNVKEGCT 420  

                   isseGalakvsfgavkyCnfskpiileilsplvpgltLVDtPGldslSva
                   +s+e                   i+l++++p ++ ++LVD+PG++   + 
   mKIAA0567   421 VSPE------------------TISLNVKGPGLQRMVLVDLPGVIN--TV 450  

                   vgdqqPeDieeqIrelteeyiskpadiILaVvpAnvaLdlstssdealfl
                   + ++ ++D++e I ++ ++y+++p++iIL++++ +v  d  +s   +  l
   mKIAA0567   451 TSGM-APDTKETIFSISKAYMQNPNAIILCIQDGSV--DAERS--IVTDL 495  

                   arevdpkgerdktigVltKd<-*
                   +++ dp+g+r  ti+VltK+   
   mKIAA0567   496 VSQMDPHGRR--TIFVLTKV    513  

MMR_HSR1: domain 1 of 1, from 333 to 514: score 5.6, E = 0.0021
                   *->lrvaivGrPNVGKSTLiNaLtgk........................
                      +rv++vG   +GK++ +  ++  +  ++++++  ++++ + + ++++
   mKIAA0567   333    PRVVVVGDQSAGKTSVLEMIAQArifprgsgemmtrspvkvtlsegp 379  

                   .............kraiVsdyP................GtTrdpnegrve
                   ++    ++++++ +  + +d +  +++ + + +++ ++G+T+ p ++ ++
   mKIAA0567   380 hhvalfkdssrefDLTKEEDLAalrheielrmrknvkeGCTVSPETISLN 429  

                   l...dgrqiilvDTPGiiegaskgeg.....elgertleaieeaDlilfV
                   +++++ ++ +lvD+PG+i +  +g  +++++ ++  + + +++  +i+++
   mKIAA0567   430 VkgpGLQRMVLVDLPGVINTVTSGMApdtkeTIFSISKAYMQNPNAIILC 479  

                   .....vDasegltedytieeDleiadllydeerernleltLqelekkgkP
                    ++++vDa +             +++                 ++  g++
   mKIAA0567   480 iqdgsVDAER--------SIVTDLVSQ----------------MDPHGRR 505  

                   vilvlNKiD<-*
                   +i+vl+K+D   
   mKIAA0567   506 TIFVLTKVD    514  

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