hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg09350/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0554  ( 684 res)   mbg09350

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FCH      Fes/CIP4 homology domain                        84.8      1e-20   1
SH3      Src homology 3 domains                          65.8    5.4e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FCH        1/1      69   162 ..     1   103 []    84.8    1e-20
SH3        1/1     620   677 ..     1    58 []    65.8  5.4e-15

Alignments of top-scoring domains:
FCH: domain 1 of 1, from 69 to 162: score 84.8, E = 1e-20
                   *->mgfwselwsddGfeaLlsrlknglrlledlkkflreRakiEeeYAkk
                      m+++ el  +d+f+ L++++++g+  le ++kf++eR +iE +YAk+
   mKIAA0554    69    MSWGTEL--WDQFDNLEKHTQWGIDILEKYIKFVKERTEIELSYAKQ 113  

                   Lqklskkyfnkkssvgdlravreteselgslkkswevllsetdalakshl
                   L  lskky++kk       ++ e e ++    k++ + l e+++ a +h+
   mKIAA0554   114 LRNLSKKYQPKK------NSKEEEEYKYTAC-KAFLSTLNEMNDYAGQHE 156  

                   qlsedL<-*
                    +se+    
   mKIAA0554   157 VISENM    162  

SH3: domain 1 of 1, from 620 to 677: score 65.8, E = 5.4e-15
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks.ddgWweGelnrtGke
                      ++++AlY +e+qne+ +s+ +G+++ v+e++++dgW + ++n   +e
   mKIAA0554   620    GTCKALYTFEGQNEGTISVVEGETLSVIEEDkGDGWTRIRRN-EDEE 665  

                   GlfPsnYVeeie<-*
                   G++P++YVe++    
   mKIAA0554   666 GYVPTSYVEVYL    677  

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