hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp12120/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0552  ( 560 res)   mbp12120

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Fez1     Fez1                                           465.8   3.5e-136   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Fez1       1/1     325   526 ..     1   220 []   465.8 3.5e-136

Alignments of top-scoring domains:
Fez1: domain 1 of 1, from 325 to 526: score 465.8, E = 3.5e-136
                   *->TkWEVCQKsGEISLLKQQLKESQAEVnQKaSEilaLraqLrdtRAqL
                      TkWEVCQK+GEISLLKQQLK+SQA+V+QK+SEi++Lr+qLr++RA+L
   mKIAA0552   325    TKWEVCQKAGEISLLKQQLKDSQADVSQKLSEIVGLRSQLREGRASL 371  

                   rekEerllgLrdAlrtKeLELEvCEgELqRklqEaaltPvDLvElrEkvg
                   rekEe+ll+Lrd++++K+++LE++EgEL+++++++altPvDLvE++E+++
   mKIAA0552   372 REKEEQLLSLRDSFGSKQASLELSEGELPPACLKPALTPVDLVEPQEALA 421  

                   slEadeaklReqadaaaaadvRmRqDAqGrPelllesdeAkvdqeGeGgt
                   s+E+deak+R+qa++aaaa+             l+ s++++v+++GeGgt
   mKIAA0552   422 SCESDEAKMRRQAGVAAAAS-------------LV-SVDGEVEAGGEGGT 457  

                   eAqlreLRrelERLRAELreERqrrerQalsFeqERlvWqeEKEkVirYQ
                   +A    LRre++RL+AEL++ER++rerQ++sF++ER+vW+eEKEkVi+YQ
   mKIAA0552   458 RA----LRREVGRLQAELAAERRARERQGASFAEERRVWLEEKEKVIEYQ 503  

                   kQLQlSYveMYqRNQaLEkeLqq<-*
                   kQLQlSYveMYqRNQ+LE++L++   
   mKIAA0552   504 KQLQLSYVEMYQRNQQLERRLRE    526  

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