hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg05983/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0531  ( 987 res)   mbg05983

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
KISc     Kinesin motor, catalytic domain. ATPase.       590.3   6.8e-173   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
KISc       1/1      37   366 ..     1   404 []   590.3 6.8e-173

Alignments of top-scoring domains:
KISc: domain 1 of 1, from 37 to 366: score 590.3, E = 6.8e-173
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv....tvtvn...
                      +++I+V +R+   RPln+ E+ ++     + + ++++++tv++ +++
   mKIAA0531    37    ECSIKVMCRF---RPLNEAEILRG----DKFIPKFkgeeTVVIGqgk 76   

                   .FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNvaTIFAYGQT
                   ++ FD+V       +p+++Qe+V++ +a+++v ++l+GYN+ TIFAYGQT
   mKIAA0531    77 pYVFDRVL------PPNTTQEQVYNACAKQIVKDVLEGYNG-TIFAYGQT 119  

                   GSGKTyTMsGtptdpgilsndladitpdepGiIPRaledlFekide....
                    SGKT+TM+G   dp            + +GiIPR+ +d+F++i + +++
   mKIAA0531   120 SSGKTHTMEGKLHDP------------QLMGIIPRIAHDIFDHIYSmden 157  

                   ..fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkkLrirEdkn
                    +f++kvSy+EIY +kirDLL+ s++n               L ++Edkn
   mKIAA0531   158 leFHIKVSYFEIYLDKIRDLLDVSKTN---------------LAVHEDKN 192  

                   gnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGnknRtvaaT
                                  + +yV+G+te+ VsS+eev++++++G++nR+va T
   mKIAA0531   193 ---------------RVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVT 227  

                   kmNeeSSRSHaiFtitleqkeklepiadektesstnegteqiksskLnLV
                   +mNe+SSRSH+iF i ++q+               n +te ++s+kL+LV
   mKIAA0531   228 NMNEHSSRSHSIFLINIKQE---------------NVETEKKLSGKLYLV 262  

                   DLAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVInALaddshdsaes
                   DLAGSE++skTg  aeG  L Ea+nINkSL+aLGnVI+ALa+        
   mKIAA0531   263 DLAGSEKVSKTG--AEGAVLDEAKNINKSLSALGNVISALAE-------- 302  

                   eatkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMIanvSPsssnyeET
                          g ++H+PYRDSK Tr+LQdSLGGN++T++++++SPs  n +ET
   mKIAA0531   303 -------GTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAET 345  

                   lsTLrFAsRaksIknkpavne<-*
                    sTL F++Rak+Ikn+++vn    
   mKIAA0531   346 KSTLMFGQRAKTIKNTVSVNL    366  

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