hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg02422/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0521  ( 740 res)   mbg02422

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     55.5    6.8e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      97   200 ..     1    82 []    55.5  6.8e-12

Alignments of top-scoring domains:
PH: domain 1 of 1, from 97 to 200: score 55.5, E = 6.8e-12
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk..........kpk
                      + +eG L +ks++++ k++ +vL ++vLl+ ++k+++    + +++ 
   mKIAA0521    97    LHLEGALCWKStSgRLKDVLAVLLTDVLLLLQEKdqkyvfasvdSKP 143  

                   gsipLsgcsvre.p.....cFeivt.dr...tlllqAeseeereeWveal
                   ++i+L++++vre +++++ +F i+ + ++++ ++++++s+e+r+ W++++
   mKIAA0521   144 PVISLQKLIVREvAneekaMFLISAsMQgpeMYEMYTSSKEDRNIWMAHI 193  

                   qsaiaka<-*
                   ++a++++   
   mKIAA0521   194 RRAVESC    200  

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