hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg16592/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0520  ( 1334 res)   mbg16592

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
CYCc     Adenylyl- / guanylyl cyclase, catalytic doma   372.1   3.4e-107   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
CYCc       1/2     306   528 ..     1   231 []   225.7  3.9e-63
CYCc       2/2    1004  1208 ..     1   231 []   146.4    3e-39

Alignments of top-scoring domains:
CYCc: domain 1 of 2, from 306 to 528: score 225.7, E = 3.9e-63
                   *->eekkktdrLLyqlLPasvAeslkegr.....................
                       ek  ++r++++++P+ +A++l+  ++++++++ +++ +++++++++
   mKIAA0520   306    VEKALKERMIHSVMPRIIADDLMKQGdeesensvkrhatsspknrkk 352  

                   ...........epvpaesydsVTilFsDIvgFTslcsastPeqvvtlLnd
                   +++ ++ +   +p  ++  ++V+ilF+DIvgFT++++  ++ ++v lLnd
   mKIAA0520   353 kssiqkapiafRPFKMQQIEEVSILFADIVGFTKMSANKSAHALVGLLND 402  

                   lysrFDriidrhggsrvvvYKVeTiGDaYMVvsGlPeeaetsaesklkdd
                   l+ rFDr++++ +     ++K+ T+GD+Y++v G+Pe++           
   mKIAA0520   403 LFGRFDRLCEQTK-----CEKISTLGDCYYCVAGCPEPRA---------- 437  

                   glteawcfavqhaeliadeaLdmveslktvkvphrkgelpgeglrvRiGi
                             +ha ++++++L+m+++++++  +      + e +++R+G+
   mKIAA0520   438 ----------DHAYCCIEMGLGMIKAIEQFCQE------KKEMVNMRVGV 471  

                   HtGpVvaGVvGlrmpRYclFGdTVNlASRmEStgdpgqIqvSeetyslLq
                   HtG+V++G  G r+   +++ ++VNlA+ mE+ g++g++++Se+t + L 
   mKIAA0520   472 HTGTVLCGILGMRRFKFDVWSNDVNLANLMEQLGVAGKVHISEATAKYL- 520  

                   lgqaerrekggfefee<-*
                           + ++e e    
   mKIAA0520   521 --------DDRYEMED    528  

CYCc: domain 2 of 2, from 1004 to 1208: score 146.4, E = 3e-39
                   *->eekkktdrLLyqlLPasvAeslkegrepvpaesydsVTilFsDIvgF
                       +++++d LL ++ P +vAe+lk  +   +++ +ds ++ F+ Iv+F
   mKIAA0520  1004    SMRDQADWLLRNIIPYHVAEQLKVSQ--TYSKNHDSGGVIFASIVNF 1048 

                   Tslc..sastPeqvvtlLndlysrFDriidrhggsrv.vvYKVeTiGDaY
                   ++++++  +   +  ++Ln+l   FD+++++ +    ++ +K++TiG +Y
   mKIAA0520  1049 SEFYeeNYEGGKECYRVLNELIGDFDELLSKPD---YnSIEKIKTIGATY 1095 

                   MVvsGlPeeaetsaes.k.lkddglteawcfavqhaeliadeaLdmvesl
                   M++sGl ++    ++++ +             ++h +   ++a +m+ ++
   mKIAA0520  1096 MAASGLNTA----QCQeGgHP-----------QEHLRILFEFAKEMMRVV 1130 

                   ktvkvphrkgelpgeglrvRiGiHtGpVvaGVvGlrmpRYclFGdTVNlA
                   + +++ +      + ++++R+G++ Gp  aGV+G+++  Y+++GdTVN+A
   mKIAA0520  1131 DDFNNNML-----WFNFKLRVGFNHGPLTAGVIGTTKLLYDIWGDTVNIA 1175 

                   SRmEStgdpgqIqvSeetyslLqlgqaerrekggfefee<-*
                   SRm  tg+ ++IqvSee y++L       +  ++f+  +   
   mKIAA0520  1176 SRMDTTGVECRIQVSEESYRVL------SKMGYDFDYRG    1208 

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