hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp09329/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0519  ( 921 res)   mbp09329

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
Exostosin Exostosin family                              313.9    1.8e-90   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
Exostosin   1/1     198   514 ..     1   407 []   313.9  1.8e-90

Alignments of top-scoring domains:
Exostosin: domain 1 of 1, from 198 to 514: score 313.9, E = 1.8e-90
                   *->VYvYdLPskFnfdllescssiiswieDmCpyiaNsGlgPpiknvevk
                      VYvYd +++F f+ + +   ++++++   + +aN+            
   mKIAA0519   198    VYVYD-SDQFAFGSYLDPLVKQAFQA---TVRANV------------ 228  

                   YPgglhrqhsswYatnqflleveiFhekmlssssrcrTkDPseAdlffVP
                                                      ++T++ + A+l++V+
   mKIAA0519   229 -----------------------------------YVTENAAIACLYVVL 243  

                   fyasldllrllgnpinaknsaekqnsslrdllqeelvkwlksypsyWnRs
                   ++  +++ + l+                    +++l+k+l s+p +W R+
   mKIAA0519   244 VG-EMQEPTVLR--------------------PADLEKQLFSLP-HW-RT 270  

                   sGrDHvivnghpggvkdfrryttnkldwgtsllllsessnlTmLsiReee
                   +G++Hvi+n++       r+++t++l +++s  +++++++ T++      
   mKIAA0519   271 DGHNHVIINLS-------RKSDTQNLLYNVSTGRAMVAQS-TFYAA---- 308  

                   qfrpgkDvaipPyptyfhPrslgeilswqgngirpekRkyLlsFaGalrp
                   q+r g+D++++P++     ++++e+++++++ ++p+kRkyL++F+G++ +
   mKIAA0519   309 QYRAGFDLVVSPLV-----HAMSEPNFMEIPPQVPVKRKYLFTFQGEKIE 353  

                   klggslprlresgliRgelidlltnskkvclfldvda.kq.q.l.eltcr
                   +l++sl+++r+++++++++  ++++++ +  +++v+++k++q l e+tc+
   mKIAA0519   354 SLRSSLQEARSFEEEMEGDPPADYDDRIIATLKAVQDsKLdQvLvEFTCK 403  

                   nq.kqQDgrCetgivnchgpldymelmrnStFCLql.PpGdr.....pts
                   nq+k   ++++t++  c++++d+ el++ StF L+++P++ r   ++ ++
   mKIAA0519   404 NQpK---PSLPTEWALCGEREDRLELLKLSTFALIItPGDPRllissGCA 450  

                   pRlfDailaGCIPViisDgSAYiqLPFsdvlDwskfSVfvpekdvlergv
                    Rlf+a+  G++PV++ ++    qLP++d+l+w++++++vp+ +v+e   
   mKIAA0519   451 TRLFEALEVGAVPVVLGEQ---VQLPYHDMLQWNEAALVVPKPRVTE--- 494  

                   slkeiLrsIpeerilemreqv<-*
                    ++++Lrs +++++l+mr+q+   
   mKIAA0519   495 -VHFLLRSLSDSDLLAMRRQG    514  

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