hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10751/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0462  ( 2056 res)   mbg10751

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ZnF_UBR1 Putative zinc finger in N-recognin, a recogn    99.4    4.1e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ZnF_UBR1   1/1     370   438 ..     1    79 []    99.4  4.1e-25

Alignments of top-scoring domains:
ZnF_UBR1: domain 1 of 1, from 370 to 438: score 99.4, E = 4.1e-25
                   *->dvCtyvftggevinQhlYrCkTCaldpetcvlCsdCFrsncHkgHdv
                      ++Ct++ t++e++nQh+Y+C+TC + +  +++C++C+  +cHk+H+ 
   mKIAA0462   370    KLCTFTITQKEFMNQHWYHCHTCKMVD-GVGVCTVCAK-VCHKDHE- 413  

                   lvslktsrgsGgiCDCGdkeAwnedlkCkahe<-*
                     s++++++  ++CDCG k    ed++C a+    
   mKIAA0462   414 -ISYAKYGS--FFCDCGAK----EDGSCLALV    438  

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