hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10751/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0462  ( 2056 res)   mbg10751

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
zf-UBR1  Putative zinc finger in N-recognin              95.7    9.4e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
zf-UBR1    1/1     370   438 ..     1    82 []    95.7  9.4e-25

Alignments of top-scoring domains:
zf-UBR1: domain 1 of 1, from 370 to 438: score 95.7, E = 9.4e-25
                   *->klCghvEGfkpgetiNQnlYrCkTCsldpGetcvlCedCFrsscHkg
                      klC+++   +++e++NQ++Y+C+TC + +   +++C++C+  +cHk+
   mKIAA0462   370    KLCTFT--ITQKEFMNQHWYHCHTCKMVD--GVGVCTVCAK-VCHKD 411  

                   HdvyvslktsrgsGgiCDCGdkeAwnedlkCknhe<-*
                   H+   s++++++  ++CDCG+k    ed++C ++    
   mKIAA0462   412 HE--ISYAKYGS--FFCDCGAK----EDGSCLALV    438  

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