hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04493/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0451  ( 344 res)   mbh04493

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PBD      P21-Rho-binding domain                          49.8    3.6e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PBD        1/1     183   218 ..     1    38 []    49.8  3.6e-10

Alignments of top-scoring domains:
PBD: domain 1 of 1, from 183 to 218: score 49.8, E = 3.6e-10
                   *->IStPtGnFkHiaHVGPfDgatgeFtglptewesllkts<-*
                      IS+Pt nF+HiaH+GP+Dg  + + +lp++ + +++++   
   mKIAA0451   183    ISNPT-NFNHIAHMGPGDG-IQILKDLPMNPRPQESRT    218  

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