hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpj/mpj02013/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0448  ( 362 res)   mpj02013

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HS2ST    Heparan sulfate 2-O-sulfotransferase (HS2ST)   837.9   3.5e-248   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HS2ST      1/1      15   360 ..     1   420 []   837.9 3.5e-248

Alignments of top-scoring domains:
HS2ST: domain 1 of 1, from 15 to 360: score 837.9, E = 3.5e-248
                   *->rlkemevllqppmgsalvALgllknriplLefsrisLedaGFCmATL
                      ++k +++l+++   +++vA+++l+n+i++Le+sr++Le+a       
   mKIAA0448    15    PPK-LQLLAVV---AFAVAMLFLENQIQKLEESRAKLERA------- 50   

                   LVFClGkHDdlkeLsgtyqrLksDgqrsslgNvrdLddHGPPPSkrldfe
                       +++H +++e+++++++   Dg+r++++               ld+e
   mKIAA0448    51 ----IARH-EVREIEQRHTM---DGPRQDAT---------------LDEE 77   

                   EqlVVvYNRVPKtGSttFvnllrdLsekNkFhvlhinvtkNktirLslde
                   E+++++YNRVPKt+St+F+n+++dL++kN++hvlhin+tkN++ ++sl++
   mKIAA0448    78 EDIIIIYNRVPKTASTSFTNIAYDLCAKNRYHVLHINTTKNNP-VMSLQD 126  

                   QvefvkNIStweEMKPslfhgHvaFLnFsKFgvldkPIYINvvRDPveRl
                   Qv+fvkNI+tw+EMKP+++hgH+++L+F+KFgv++kPIYINv+RDP+eRl
   mKIAA0448   127 QVRFVKNITTWNEMKPGFYHGHISYLDFAKFGVKKKPIYINVIRDPIERL 176  

                   vSyYYFlRAPWYFGDWRkeyrHmPdLrrPSmrkagrKkdFdECVlegdpe
                   vSyYYFlR    FGD   +yr  P+Lrr   rk+g+Kk+FdECV+eg+++
   mKIAA0448   177 VSYYYFLR----FGD---DYR--PGLRR---RKQGDKKTFDECVAEGGSD 214  

                   CTYTqGVTVEGiGdpkrlwLqIPFFCGHdaECTPFwevGSeWALerAKfN
                   C            +p++lwLqIPFFCGH++EC   w+vGS+WA+++AK N
   mKIAA0448   215 C------------APEKLWLQIPFFCGHSSEC---WNVGSRWAMDQAKSN 249  

                   veneYfLVGVlEeLedfllLLErfLPRfFkGvrdiYktPEHrkkshLtkt
                   ++neYfLVGV+EeLedf++LLE++LPRfF+G++d+Y+t   +kkshL+kt
   mKIAA0448   250 LINEYFLVGVTEELEDFIMLLEAALPRFFRGATDLYRT---GKKSHLRKT 296  

                   vkKNFkpPseetvkklqqrdiwrmEnEFYeFaleQFHkqflKFGLksHvs
                   ++K  k+P+++t++klqq+diw+mEnEFYeFaleQF  qf+    ++H++
   mKIAA0448   297 TEK--KLPTKQTIAKLQQSDIWKMENEFYEFALEQF--QFI----RAHAV 338  

                   kekllpqfiiltqkftyEkIddk<-*
                   +ek+++++i l+q+f+yEkI++k   
   mKIAA0448   339 REKDGDLYI-LAQNFFYEKIYPK    360  

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