hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06146/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0438  ( 711 res)   mbg06146

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
zf-C3HC4 Zinc finger, C3HC4 type (RING finger)           32.1    1.3e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
zf-C3HC4   1/1     637   677 ..     1    50 []    32.1  1.3e-05

Alignments of top-scoring domains:
zf-C3HC4: domain 1 of 1, from 637 to 677: score 32.1, E = 1.3e-05
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+IC+ e++ +    +++lpC+H      f+++C++ wl+  ++ tC
   mKIAA0438   637    CPICCSEYIKDD--IATELPCHHF-----FHKPCVSIWLQ--KSGTC 674  

                   plC<-*
                   p+C   
   mKIAA0438   675 PVC    677  

//