hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg09138/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA0435  ( 1388 res)   mbg09138

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
Pecanex_C Pecanex protein (C-terminus)                  480.0   1.9e-140   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
Pecanex_C   1/1     863  1095 ..     1   238 []   480.0 1.9e-140

Alignments of top-scoring domains:
Pecanex_C: domain 1 of 1, from 863 to 1095: score 480.0, E = 1.9e-140
                   *->eeiakvkvdKdfdvelVtlCyalsLlgrrsLatasghilssavEsFl
                      +     +vd d d+ lVtl +al++lgrr+L+ta  h +   ++sFl
   mKIAA0435   863    KT--LEHVDSDEDSALVTLAFALCILGRRALGTAA-HNMAMSLDSFL 906  

                   YGLHaLFKGdfrItSvrdeWvfadmeLlrqvvlpAvrmaLKLhqDhftlp
                   YGLHaLFKGdfr    rdeWvfadm+Ll++vv+pA+rm+LKLhqD+ft p
   mKIAA0435   907 YGLHALFKGDFR-VTARDEWVFADMDLLHKVVVPAIRMSLKLHQDQFTCP 955  

                   defddpreLykaieeyerdlvIshesDpkWrsAiLankPsLlaLrhvmdd
                   de++dp +Ly+ai ++ ++ vI he+Dp+Wr A L nk  Ll Lrhv d 
   mKIAA0435   956 DEYEDPAVLYEAIRSFAKKVVICHEGDPAWRGAMLSNKEELLTLRHVVDE 1005 

                   GideyriimLneryLsirViKLNrEcVRglWAgqqqELiylrNrnpERgS
                   G dey++imL + +Ls++ViK+N+EcVRglWAgqqqELi+lrNrnpERgS
   mKIAA0435  1006 GADEYKVIMLHRGFLSFKVIKVNKECVRGLWAGQQQELIFLRNRNPERGS 1055 

                   IQnakqlLRNlinssadqPiGYPIYvSkPLTTSyadshiqL<-*
                   IQn kq+LRNlinss+dqP+GYP YvS PLTTSy  +h+qL   
   mKIAA0435  1056 IQNNKQVLRNLINSSCDQPLGYPMYVS-PLTTSYLGTHKQL    1095 

//