hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mid/mid08083/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0432  ( 832 res)   mid08083

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Myb_DNA-binding Myb-like DNA-binding domain              81.9    1.3e-20   2

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Myb_DNA-binding   1/2      38    84 ..     1    65 []    48.4  1.6e-10
Myb_DNA-binding   2/2      90   134 ..     1    65 []    37.1  3.9e-07

Alignments of top-scoring domains:
Myb_DNA-binding: domain 1 of 2, from 38 to 84: score 48.4, E = 1.6e-10
                   *->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
                      +g+W   Ede+l++av+k+Gk+          +W++Ia +l      
   mKIAA0432    38    GGVWRNTEDEILKAAVMKYGKN----------QWSRIASLLH----- 69   

                   nvlgrtaeqcklryykyk<-*
                      +++a+qck r+y ++   
   mKIAA0432    70 ---RKSAKQCKARWYEWL    84   

Myb_DNA-binding: domain 2 of 2, from 90 to 134: score 37.1, E = 3.9e-07
                   *->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
                      + +W+ eE+e+l+++ ++++++           W++Ia  +g     
   mKIAA0432    90    KTEWSREEEEKLLHLAKLMPTQ-----------WRTIAPIIG----- 120  

                   nvlgrtaeqcklryykyk<-*
                       rta qc ++y  ++   
   mKIAA0432   121 ----RTAAQCLEHYEFLL    134  

//