hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm06348/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0429  ( 773 res)   mpm06348

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
WH2      WH2 motif                                       23.1     0.0065   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
WH2        1/1     745   762 ..     1    21 []    23.1   0.0065

Alignments of top-scoring domains:
WH2: domain 1 of 1, from 745 to 762: score 23.1, E = 0.0065
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      ++ ++L+aIr   +G+kLKK+   
   mKIAA0429   745    QGEDMLNAIR---RGVKLKKT    762  

//