hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mic/mic03091/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0427  ( 267 res)   mic03091

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
MIF4G    MIF4G domain                                   152.8    6.1e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MIF4G      1/1      45   246 ..     1   230 []   152.8  6.1e-42

Alignments of top-scoring domains:
MIF4G: domain 1 of 1, from 45 to 246: score 152.8, E = 6.1e-42
                   *->lkkvngllnkLsespenfe.iikellklnmsdlreeDennkellksl
                       + +n+++n+ s+ ++++++ ++e  +  +s+         e+l+++
   mKIAA0427    45    MEILNSMRNNSSDVDAKLTsFMEEAQNSTNSE---------EMLGEI 82   

                   lelifekaveepnfipayArLcalLnsknpgekteFgslllnrlqeeFek
                   +++i++kav+ ++f+ + A+Lc ++++++  e+t F+sllln+lq++F++
   mKIAA0427    83 VRTIYQKAVSDRSFAFTAAKLCDKMALFMV-EGTKFRSLLLNMLQKDFTV 131  

                   releaeleeeersdrkrrlglvrFlgELynfqvltekiileilkelledl
                         +ee++++d +r+lg+++Fl+E +  +  ++   + +l + +  +
   mKIAA0427   132 ------REELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRVLVCPIYTC 175  

                   teedlqdqvrdeeslecllllLetiGklLdnsekskklmdeilerlqkil
                   ++e+lq q++ e+ + c+ + L+++G+lL+  e+++++m+e+l+  ++++
   mKIAA0427   176 LRELLQSQDVKEDAVLCCSMELQSTGRLLE--EQLPEMMTELLASARDKM 223  

                   lkrdkshvrvesepelssrirfmledlielrknk<-*
                   l+           p+ s+ +r++l+ +iel++n    
   mKIAA0427   224 LC-----------PSESMLTRSLLLEVIELHANS    246  

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