hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm06367/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0425  ( 1578 res)   mpm06367

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
zf-MYM   MYM-type Zinc finger                           273.1    3.6e-78   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
zf-MYM     1/9     391   431 ..     1    43 []    48.7  1.3e-10
zf-MYM     2/9     443   486 ..     1    43 []    46.3  6.9e-10
zf-MYM     3/9     493   528 ..     1    43 []    28.1   0.0002
zf-MYM     4/9     539   573 ..     1    43 []    35.1  1.6e-06
zf-MYM     5/9     583   621 ..     1    43 []    45.2  1.5e-09
zf-MYM     6/9     629   660 ..     1    43 []     3.3      3.6
zf-MYM     7/9     737   771 ..     1    43 []    42.0  1.3e-08
zf-MYM     8/9     778   817 ..     1    43 []    36.5  6.2e-07
zf-MYM     9/9     824   858 ..     1    43 []    41.6  1.8e-08

Alignments of top-scoring domains:
zf-MYM: domain 1 of 9, from 391 to 431: score 48.7, E = 1.3e-10
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      +lFCS+ Cl+ y +  +++ ++ tk t  Cs C+k+i+n++++   
   mKIAA0425   391    QLFCSTLCLTGYTVPPARPPPPLTKKT--CSSCSKDILNPKDV    431  

zf-MYM: domain 2 of 9, from 443 to 486: score 46.3, E = 6.9e-10
                   *->klFCSesClskykrknnvkaglvtkrt.trCsyCkkeisnleel<-*
                      k+FCS+sCls+y+ k ++++++ t +++t+Cs+C+k +  ++e+   
   mKIAA0425   443    KDFCSQSCLSTYELKKKPIVTINTNSIsTKCSMCQKNAVIRHEV    486  

zf-MYM: domain 3 of 9, from 493 to 528: score 28.1, E = 0.0002
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      +  CS++C+sk+++ nn  +++       C++C+ ++++++     
   mKIAA0425   493    HKLCSDACFSKFRSANNLTMNC-------CENCGGYCYSGSGQ    528  

zf-MYM: domain 4 of 9, from 539 to 573: score 35.1, E = 1.6e-06
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      k FCS+ C ++yk+k +++++        C+ Ck++ s+ e++   
   mKIAA0425   539    KKFCSSMCVTSYKQKSAKITP--------CALCKSLRSSAEMI    573  

zf-MYM: domain 5 of 9, from 583 to 621: score 45.2, E = 1.5e-09
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      +lFCS +Cls+y++k +++ag++++    C  Ck+ + ++++l   
   mKIAA0425   583    ELFCSVNCLSAYRVKMVTSAGVQVQ----CNSCKTSAIPQYHL    621  

zf-MYM: domain 6 of 9, from 629 to 660: score 3.3, E = 3.6
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      + FCS sC  +++  +n+++g             + + +l+++   
   mKIAA0425   629    RNFCSYSCVVAFQNLFNKPTGM-----------NSSVVPLSQG    660  

zf-MYM: domain 7 of 9, from 737 to 771: score 42.0, E = 1.3e-08
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      ++FC ++C+++yk+ nnv+a+        C+yCk e+  +e++   
   mKIAA0425   737    FQFCGKNCCDEYKKINNVMAM--------CEYCKIEKIIKETV    771  

zf-MYM: domain 8 of 9, from 778 to 817: score 36.5, E = 6.2e-07
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      k FCSe+C   yk+++++++g ++k+   CsyC ++ + l +    
   mKIAA0425   778    KSFCSEGCKLLYKHDLGKRWGSHCKM---CSYCLQTSPKLIQN    817  

zf-MYM: domain 9 of 9, from 824 to 858: score 41.6, E = 1.8e-08
                   *->klFCSesClskykrknnvkaglvtkrttrCsyCkkeisnleel<-*
                      ++FC+e C+sky + + ++a+        C+ Ck++++++e+l   
   mKIAA0425   824    EDFCCEECMSKYTVLFYQMAK--------CDGCKRQGKLSESL    858  

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