hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg17620/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0423  ( 1762 res)   mbg17620

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     23.0     0.0072   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/7     178   213 ..     1    36 []     3.3       83
HEAT       2/7     392   427 ..     1    36 []     4.5       57
HEAT       3/7     467   501 ..     1    36 []     3.5       78
HEAT       4/7     513   543 ..     1    36 []    10.0      9.6
HEAT       5/7    1375  1412 ..     1    36 []     1.5  1.5e+02
HEAT       6/7    1585  1620 ..     1    36 []     7.0       25
HEAT       7/7    1625  1662 ..     1    36 []     7.5       22

Alignments of top-scoring domains:
HEAT: domain 1 of 7, from 178 to 213: score 3.3, E = 83
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +  l  llp l+  l+ ++p  R+ A++ L   ++     
   mKIAA0423   178    AfSL-ALLPQLVVSLREDNPALRKDALQILHICLRRS    213  

HEAT: domain 2 of 7, from 392 to 427: score 4.5, E = 57
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++l+  ++ ll +ll+D++ +V   +++ L  l+  l   
   mKIAA0423   392    AsLV-GFISLLYNLLDDSNFKVVHGTLQVLHLLVIRL    427  

HEAT: domain 3 of 7, from 467 to 501: score 3.5, E = 78
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e   +++l lll+ l++++++VRe +++    +++ l   
   mKIAA0423   467    EvGPQRVLSLLLENLKHKHSRVREEVVN--ICICSLL    501  

HEAT: domain 4 of 7, from 513 to 543: score 10.0, E = 9.6
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++       l  +l D+  +VR+aA+ea++ la+ +   
   mKIAA0423   513    LsFD------LAPALVDSKRRVRQAALEAFAVLASSM    543  

HEAT: domain 5 of 7, from 1375 to 1412: score 1.5, E = 1.5e+02
                   *->e.lldellplllkllnDp.dpeVReaAaeaLgalaevl<-*
                      + +  + +  l+++ ++  +  VR+ +a+ L++++e++   
   mKIAA0423  1375    NvTPARAVTSLINGGQSHlHIAVRRCTAQHLADVVECM    1412 

HEAT: domain 6 of 7, from 1585 to 1620: score 7.0, E = 25
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++ +++ ++ + l+D++++V + A+e++ ++++ l   
   mKIAA0423  1585    GnIV-KIFDAFKSRLHDSNSKVNLVALETMHKMIPLL    1620 

HEAT: domain 7 of 7, from 1625 to 1662: score 7.5, E = 22
                   *->e.lldellplll.kllnDpdpeVReaAaeaLgalaevl<-*
                      +++++ l+p+++++ ln+++p + +aA + + al+++    
   mKIAA0423  1625    SpIINMLIPAIVdNNLNSKNPGIYAAATNVVHALSQHN    1662 

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