hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh03531/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA0422  ( 391 res)   mbh03531

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
CYCc     Adenylyl- / guanylyl cyclase, catalytic doma   164.3    1.2e-44   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
CYCc       1/1     162   370 ..     1   231 []   164.3  1.2e-44

Alignments of top-scoring domains:
CYCc: domain 1 of 1, from 162 to 370: score 164.3, E = 1.2e-44
                   *->eekkktdrLLyqlLPasvAeslkegr...epvpaesydsVTilFsDI
                      e +  + rLL+++LP++vA +  + ++++++ + +s ++V+++F+ I
   mKIAA0422   162    ELQAYNRRLLHNILPKDVAAHFLARErrnDELYYQSCECVAVMFASI 208  

                   vgFTslc....sastPeqvvtlLndlysrFDriidrhggsrvvvYKVeTi
                    +F++++ + ++ ++  +  +lLn++   FD+ii++   +    +K++Ti
   mKIAA0422   209 ANFSEFYveleANNEGVECLRLLNEIIADFDEIISEERFRQ--LEKIKTI 256  

                   GDaYMVvsGlPeeaetsaesklkddglteawcfavqhaeliadeaLdmve
                   G +YM++sGl  ++                +     h+   ad a+  +e
   mKIAA0422   257 GSTYMAASGLNASTY---------------DQVGRSHITALADYAMRLME 291  

                   slktvkvphrkgelpgeglrvRiGiHtGpVvaGVvGlrmpRYclFGdTVN
                    +k+ +++h+     ++++++ iG++ GpVvaGV+G+r+p Y+++G+TVN
   mKIAA0422   292 QMKH-INEHS-----FNNFQMKIGLNMGPVVAGVIGARKPQYDIWGNTVN 335  

                   lASRmEStgdpgqIqvSeetyslLqlgqaerrekggfefee<-*
                   + SRm Stg+p++Iqv+ + y++L        + ++ e+ +   
   mKIAA0422   336 VSSRMDSTGVPDRIQVTTDLYQVL------AAKGYQLECRG    370  

//