hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp11181/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0409  ( 459 res)   mbp11181

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Methyltransf_8  Hypothetical methyltransferase          519.5   2.5e-152   1
Methyltransf_11 Methyltransferase domain                 30.0    5.3e-05   1
Methyltransf_12 Methyltransferase domain                 20.9      0.031   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Methyltransf_12   1/1     316   391 ..     1   100 []    20.9    0.031
Methyltransf_11   1/1     316   393 ..     1    99 []    30.0  5.3e-05
Methyltransf_8    1/1     240   459 .]     1   246 []   519.5 2.5e-152

Alignments of top-scoring domains:
Methyltransf_12: domain 1 of 1, from 316 to 391: score 20.9, E = 0.031
                   *->LdiGcGtGrllaalleallnpgaeytgvDiSp.aleiaaaaerladl
                       d+GcG+ rl++ + +        +++ D+                 
   mKIAA0409   316    ADFGCGDCRLASSVRNP-------VHCFDLASlDP------------ 343  

                   gl.va.rvrldvldlidedpsfDvvvafnvLhhldpedpravLrnlrrlL
                   + +v++  +++ +d      s+Dv+v  ++L+ +   ++r++L+++ r+L
   mKIAA0409   344 RVtVCdMAQVPLEDE-----SVDVAV--FCLSLM-GTNIRDFLEEANRVL 385  

                   kPGGvl<-*
                   k GG+l   
   mKIAA0409   386 KTGGLL    391  

Methyltransf_11: domain 1 of 1, from 316 to 393: score 30.0, E = 5.3e-05
                   *->LDvGcGtGllaraLarrvgpgarvtGvDlspemlalArerapeagle
                       D+GcG  +la   +        v++ Dl     +            
   mKIAA0409   316    ADFGCGDCRLASSVRNP------VHCFDLASLDPR------------ 344  

                   nfvvgDaedLPfpDesFDlVvssevlhhlaedperalrEiaRVLKPGGkl
                    + v+D+ + P++Des+D++v  ++l+    + +++l+E+ RVLK GG+l
   mKIAA0409   345 -VTVCDMAQVPLEDESVDVAVFCLSLMGT--NIRDFLEEANRVLKTGGLL 391  

                   vi<-*
                    +   
   mKIAA0409   392 KV    393  

Methyltransf_8: domain 1 of 1, from 240 to 459: score 519.5, E = 2.5e-152
                   *->dLlekmkkrLdGgrFRyLNEQLYstpsskAedLFrEdpeaFdlYHaG
                      +L+++m++rLdG+rFRyLNEQLYs+pss+A +LF+EdpeaF+lYH+G
   mKIAA0409   240    ALRARMTQRLDGARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRG 286  

                   YrqQVkkWPinPldvIirkLLkdRrgrfvANKaKSMPGkiPkswViADlG
                   ++ QVkkWP++P+d+I+++ L+                ++P+s+V+AD+G
   mKIAA0409   287 FQRQVKKWPLHPVDRIAKD-LR----------------QKPASLVVADFG 319  

                   CGEAkiAstasvpekytVhSFDLvAvnedVtvCDiRakvPLeDesVDVAV
                   CG++++A  +sv+++  Vh+FDL++++++VtvCD+ a+vPLeDesVDVAV
   mKIAA0409   320 CGDCRLA--SSVRNP--VHCFDLASLDPRVTVCDM-AQVPLEDESVDVAV 364  

                   fCLSLMgTdladflkEAnRVLKpgGlLkIAEVrSRfpDksvreFaravek
                   fCLSLMgT+++dfl+EAnRVLK gGlLk+AEV+SRf+  ++r+F+ av+k
   mKIAA0409   365 FCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFE--DIRTFLGAVTK 412  

                   lGFdvdskDvandyFvlFdFkKvdGQevpkvgpKrep.glkLvPcLYKKR
                   lGF++ +kD++n++F+lFdF K++   +p+vgpK++++glkL+PcLYK+R
   mKIAA0409   413 LGFKIIYKDLTNSHFFLFDFEKTG---PPRVGPKAQLsGLKLQPCLYKRR 459  

                   <-*
                      
   mKIAA0409     -     -    

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