hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh00510/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0388  ( 758 res)   mbh00510

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SET      SET domain                                     186.9    3.3e-52   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SET        1/1     618   745 ..     1   261 []   186.9  3.3e-52

Alignments of top-scoring domains:
SET: domain 1 of 1, from 618 to 745: score 186.9, E = 3.3e-52
                   *->vqkgrwarlegfktegkGwGlratedIpkGefiiEYpGelitseeae
                       q+g +++l ++ ++++GwG + +e+++k+efi EY+Geli+++ea+
   mKIAA0388   618    IQRGLKKHLLLAPSDVAGWGTFIKESVQKNEFISEYCGELISQDEAD 664  

                   kreddllgpkyydddgdksldeYlfdldalfLlrEkleSWkpYiiLPtys
                   +r+      k yd++++     +lf+l++                     
   mKIAA0388   665 RRG------KVYDKYMSS----FLFNLNN--------------------- 683  

                   PlfWseeeleLkGTqllevdkeeleeydllaeeievflqhklFpdveeef
                                                                     
   mKIAA0388     - -------------------------------------------------- -    

                   sfedflWaasivsSRafslvegvnreeensegslelviDAtrkGNiaRFi
                                                     ++v+DAtrkGN +RF 
   mKIAA0388   684 ----------------------------------DFVVDATRKGNKIRFA 699  

                   NHSCePNcevqvvfvdgedlgdsdvtDeaglepgdprivlfAlrdIpaGe
                   NHS +PNc+++vv+v+                 gd+ri++fA+r I+aGe
   mKIAA0388   700 NHSVNPNCYAKVVMVN-----------------GDHRIGIFAKRAIQAGE 732  

                   ELtydYgydksnge<-*
                   EL++dY  ++  +    
   mKIAA0388   733 ELFFDYR-YSQADA    745  

//